Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MLISPLMGPIMGLGYGIGIYDFALIRRSLKTLAISTLISLATSALYFSLSPLTGEHSELLARTSPSIWDVLIALFGGLVGMVGATRSERTNVIPGVAIATALMPPLCTAGYGLAHGSLPYFAGAFYLFSINCVFIAF |
1 | 5d0yA | 0.12 | 0.11 | 3.91 | 1.07 | SPARKS-K | | --LRELVLLAMVIAIKVVLGGLGFIGSVMLGYLFGPWWGFAGGALSDLVSSAIFGNL-----GGFFIGFTLTAALESMIYGFFLYKKPIQRVIASVICVTVICYIGLNTLWVSMLGGTNFMVALSSRILKEMITPWI |
2 | 6mjpF1 | 0.12 | 0.10 | 3.61 | 1.50 | SP3 | | -----------------MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADMILSIVGLNMPAMGLLMLPLSLYIGILLTFGRLYAESEITGIG-NKFLIRAALYLALITAS--VAAFNALWLAPWSQDKEAHL |
3 | 4j05A | 0.11 | 0.11 | 3.96 | 1.00 | SPARKS-K | | KLFQLATGNIIVTALGFLPGYYFTLVGRKKLQFMGFIMSGLFLAILAGEIDHIGKGPLLACFTFMQFFFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFI |
4 | 5xtcV | 0.16 | 0.15 | 4.85 | 0.85 | FFAS-3D | | -------APKVFRQYWDIPDGTDCHRKAYSTTSIASVAGLTAAAYRVTLNPPGTFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREKPDDPLNYFLG------GCAGGLGARTHNYGIGAAACVYFGIAASLVKM |
5 | 3kbcA | 0.09 | 0.09 | 3.34 | 0.27 | HHpred | | MLVMPIVFASLVVGAASIARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPAVQLVHILLDIVPNPFTIFFAIILGIAITYLMNSEKSAETLLDAIVNVMQYAPIGVFALIAYEQGVHVV-GELAKVTAAYVGL-- |
6 | 6fv6A2 | 0.09 | 0.09 | 3.34 | 0.90 | MUSTER | | RIESISFMIGFGVMIASTT-NYRGMVHAVNTSAHFTALVMSLTGLILILFPVYPFSPEVIEWASY-GISQPAMAYASIYSGALKGMGKSSFWLFRIIPSYFLLKVISPLVPWGFMT-FETAVRALFYYTVFKKVVGK |
7 | 3rkoC | 0.12 | 0.11 | 3.87 | 1.00 | CNFpred | | -----MLGFFIAFAVKMPV-WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSPLFPNASAEF--APIAMWLGVIGIFYGAWMAFAQ----TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG |
8 | 4guaA | 0.26 | 0.09 | 2.93 | 0.61 | HHsearch-2 | | ---------------------------------------------------------------------------------------NPFSCKTNVCWAKALEPILATAGIVLTGCQWSELFPQFAIYALDVICIKF |
9 | 6fv6A2 | 0.08 | 0.08 | 3.17 | 0.91 | Neff-PPAS | | RIESISFMIGFGVMIASTTLNYRGMVHAVNTSAHFTALVMSLTGLILILFPSPEVIEWASYYLQIVGISQPAMAYASIYSGALKGMGKTHIPLFVNISSFWLFRIIPSYFLLKVISPLVPWGFMTFETAVRALFYYT |
10 | 2lorA | 0.15 | 0.10 | 3.45 | 0.42 | HHsearch | | -----------MVNLGLSRDGLGEYAACQHAFMKGVF-TFVTGTGMAFGL------QMFIQRKFPLQWSLLVAVVAGSVVSYGVTRVE-SEKCNNLWLFLETLPKDRSTD------QRS------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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