Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | PRYMGLLGWDCTEECKYECMWDTVETFQRAGKDVPQFYGKWPFVRVLGAQEPASVVFSVLNGLAHLVMIGVFRSRVPKDATLYWTVNVYALVAVNAWIWSTVFHTRDLVWTERLDYFSATSIIFFQLFHCFRRCFGGFWKSLIFGAVLLRLFAGHVYYLSAVKFDYGYNMKVMVTVAVVNGVFWFVLAIKNRKQPHMWKCGTAIVLVNLLGLLEVGDFAPIWWTFDGHALWHAGTAPVVVLWYRIL |
1 | 3wajA1 | 0.09 | 0.09 | 3.23 | 1.12 | SPARKS-K | | PWNSVFTWTVRLGGNDPWYYYRLIENTIHNFPHRIYYPYGSYTHFGPFLVYLGSIAGIILRAVLAFIPAIGGVLAI---LPVYLLTREVAVIAAFLIAIVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRQMAYPVIAGITIGLYVLSWG---------------AGFIIAPIILAFMFFAFVLAVNADRKNLSLVAVVTFAVSALIYLPFAFNYPFYSPFQLLVLLGSAVIAAAFYQIE |
2 | 3wxvA | 0.13 | 0.12 | 4.12 | 1.12 | FFAS-3D | | ------------SEGRWRVIYDVLPDWLKDNDYLLHGH-RPPMPSF---RACFKSIFETGNIWTHLLGFVLFLFLGMAPLQEKVVFGMFFLGAVLCLSFSWLFHTKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVFFLMAVMYITGAGLYAARIPERFFPFDSHQIFHVLVVAAAFVHFYGV |
3 | 3wxvA | 0.17 | 0.15 | 4.97 | 0.40 | HHpred | | ---WRVIPYDV------LPDWLKDNDYLLHGHRPP--MPSFRFKSIFRHTE-------TGNIWTHLLGFVLFLFRMYFMAPLKVVFGMFFLGAVLCLSFSWLFHTVYCHTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQRLILSVCVLGIS---AIIVAWDRFATPHQTRAGVFLGLGGVVPTMHFTIAEGTTVMGW-FFLMAVMYITGAGLYAARIPGKFDIWQSHQIFHVLVVAAAFVHFYG- |
4 | 5t77A2 | 0.08 | 0.07 | 2.58 | 0.87 | MUSTER | | PYGLFAVS---------TVVLSKISNDRKNFNYH--------LNDALKTTLFFTIPSMVGLIFLSTPIIRFFYEHGAFTSKILIAYTLGLPFYGIYSTISRSYHAIKNT---KTPFIAATIVSLSNIILDIIFGLKYGPIGVALATSIAGIIGVLYLLFSVKTFPIKDFLKISLNSLIMLFVIYLTDFT---DNEFWFLIQILIGILVYLIFSSIFYRDLIRRFL--------------------- |
5 | 4he8F | 0.09 | 0.07 | 2.77 | 1.23 | CNFpred | | ----------------------------------------WLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYS---VLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL-KMGGLWKHLPQTRWHALIGALALGGLP-------LLSGFWSKDAILAATLTYPFGGVGFYVGALLVAVLTAMYAMRWFVLVFL |
6 | 3wxvA | 0.15 | 0.14 | 4.67 | 1.46 | HHsearch-2 | | EGRWRVIPYDVL------PDWLKDNDYLLHGHRPPM--PSFCFKSIFRIHTE------TGNIWTHLLGFVLFLLRMYFMAPEKVVFGMFFLGAVLCLSFSWLFHTVYCRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQRIYLSIVCVLGISAIIV-AQWDRFATPKHTRVFLGLGLSGVVPTMHFTIAEKATTVMGWFFLMAVMYITGAGLYAARIPERFGKFQSHQIFHVLVVAAAFVHFYGV |
7 | 5ezmA1 | 0.09 | 0.09 | 3.39 | 1.03 | Neff-PPAS | | -VWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTKYFEKVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALWRRLHLALGVVVMLVITVPWFYLVSVRNFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSIS-----RSKLPGYIVPVIPALGILAGVALDRL- |
8 | 3wxvA | 0.15 | 0.14 | 4.67 | 1.15 | HHsearch | | ------GSEGRWRVIPYDPDWLKDNDYLLHGHRPPM--PSFRFKSIFRIHTE------TGNIWTHLLGFVLFLLRMYFMAPEKVVFGMFFLGAVLCLSFSWLFHTVYCRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQRIYLSIVCVLGISA-IIVAQWDRFATPKQTRAFLGLGLSGVVPTMHFTIAEGATTVMGWFFLMAVMYITGAGLYAARIPRFFGKFDSHQIFHVLVVAAAFVHFYG- |
9 | 5cwmA | 0.08 | 0.07 | 2.88 | 1.00 | PROSPECTOR2 | | DPEDELK----RVEKLVKEAEELLRQAKEKGS-----------------EEDLEKALRTAEEAARE--AKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELR |
10 | 3wxvA | 0.15 | 0.11 | 3.68 | 0.25 | SAM | | -----------------------------------------------------------GNIWTHLLGFVLFLFLGIAPLQEKVVFGMFFLGAVLCLSFSWLFHTKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCPQPLIYLSIVCVLGISAIIVAQWATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEG-TTVMGWFFLMAVMYITGAGLYAARIPERFIWFQSHQIFHVLVV---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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