Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GFRNGLSPSQSLLHRLRSRPWLLLLALGLGLLLLVIICVVGSQNSKFQRDLVTLRTDFSNFTSNTVAEIQAVTSQGSSLQEMIASLKAEVEGHKQELQTLHSEMLLRVQQLVQDLNKLTCQVAVL |
1 | 6egcA | 0.20 | 0.19 | 6.13 | 0.70 | SPARKS-K | | EIIRELERSLREQEELAKRLKELLRELERLQREG-------SSVRELLREIKELVEEIEKLAREQKYLVEELKRQGNELAKRLKELLRELERLQREGSSDVRELLREIKELVEEIEKLAREQKYL |
2 | 5xg2A | 0.12 | 0.10 | 3.71 | 0.87 | FFAS-3D | | ------------ARKSLYEGEARIKRAEEEKERLKAEILTGEARENLRRLVEEKRAEISELERRLRIKLSDLEKELELARKDLEKVLAEERAVREEIKRRINELDTLIERERGELAKLRGRIERL |
3 | 1m1jD | 0.13 | 0.08 | 2.76 | 0.33 | HHpred | | --------------------------------------NYGHVSTELRRRIVTLKQRVAT----QVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKEGYDNIQKHLTQASSIMHP-------- |
4 | 5xg2A | 0.18 | 0.18 | 5.72 | 0.80 | MUSTER | | RLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIER----ERGELAKLRGRIERLERKRDKLKKALEPEARELTEKIRAVEKEIAALREELSRVEGKLEGL |
5 | 5xbjA | 0.14 | 0.13 | 4.39 | 0.64 | CNFpred | | --------DEYSYYKLKGASTQLEYTKYMASTLQEIAQRFPDLNTGILQDLENYNKAWNDFASNENATKIALVKASQTLTESVNNTFATLDKIQKKVNDDIKNTVDEINRIGEEIATINKQIYGQ |
6 | 6f1tX2 | 0.13 | 0.09 | 3.04 | 0.55 | HHsearch-2 | | --------------------------------------QHIIRLESLQAEIKMLSDRKRELESATLEENDLLQGTVEELQDRVLILERQGHDKDLQ----LHQSQLELQEVRLSYRQLQGGGGGG |
7 | 3na7A1 | 0.10 | 0.09 | 3.29 | 0.79 | Neff-PPAS | | -----------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEILNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL |
8 | 6f1tX2 | 0.16 | 0.11 | 3.74 | 0.69 | HHsearch | | ------------------QHIIRLESL-------------QAEIKMLSDRKRELEHRLSA----TLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQELQEVRLSYRQLQGGGGGGGGGGGG- |
9 | 2otoB | 0.08 | 0.08 | 3.15 | 0.61 | SP3 | | -AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQA |
10 | 1eq1a | 0.10 | 0.10 | 3.81 | 0.64 | PROSPECTOR2 | | DAPAGGNAFEEMEKHAKEFQKTFSEQFNLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVAKLAPKIKQAYDDFVKHAEEVQKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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