Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MAYTPYSYVQLKADGATTNFPFNFPYLDTAHIQVSVDTVVTDFTWVDSYTIRIASAPVAGGVVEIRRITPKDSAIVSFQDGSTLLEADLDLMVTYNLYCAQEAYDGTQASIHLTADGVWDGQGVRATDFADPVDAQDLMTLNYMNVNFKNTML |
1 | 3qd1X1 | 0.13 | 0.10 | 3.40 | 0.84 | SPARKS-K | | GDMIQSVTTSFDDTSRLLTWTINLTPRQVKGALVSISGNTRTVTINGAWN-LYTGESVNNNVLRITTQVNDTGGEVKLGSDKKITKTNLP---------------LEFSQVAATTNGSWDKAGYNTTIVEK---------------------- |
2 | 3n50A | 0.13 | 0.08 | 2.97 | 0.48 | FFAS-3D | | -CIKAISPSEGWTTGGA-TVIIIGDNFFDG-LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTFCKGAPGRFVYTALNE---PTIDYGFQRLQVLLKRAADLVEA-------------------------------------------- |
3 | 2zxqA | 0.07 | 0.05 | 2.16 | 0.39 | HHpred | | --DSEQKLYHWNTKGGTTTWTLPDSWKNLSSVKVYQTDQGQTVAVS-GGKVTLTA--DAETPYVVYKGEA-KQIQVNWSEGMHVVDAGFNGGSN----TLTDNWTVSGSKAEVEG------DNNAMLRLTG---------------------- |
4 | 5n8pA | 0.14 | 0.14 | 4.67 | 0.72 | MUSTER | | SGVTGLTALNTNTSGAAQTVTAG----AGQNLTATTAAAANNVAVDGGANVTVASTGVTSGTTTVG-SAASGTVSVSVANSSTTTTGAIAVTGGTAVTVAQNAVNTTLTQADVTVTGNSSTTAVTVTQTAAATAGATVAGRVNGAVTITDSAA |
5 | 1a6dB | 0.07 | 0.04 | 1.61 | 0.53 | CNFpred | | ---------------------------------------------GTAERVEQVKV-GEDYMTFVTGCK---KAVSILVRGEEHVVDEMERSITDSLHVVASALED-----------------GAYAAGG---GATAAEIAFRLRSYAQKIGG |
6 | 5iv5I3 | 0.15 | 0.07 | 2.43 | 0.98 | HHsearch-2 | | ISNV--ARKEFLVVQGQTDFLDVFRSYNVNNIRVKHRGNGSELVPLDGFNIRLRQPCNIGDTVQIETFMDG---VSQWRS------------------------------------------------------------------------- |
7 | 3zgiA | 0.12 | 0.11 | 3.96 | 0.74 | Neff-PPAS | | --VPIYYKLKVTNDGSKLTFTYTVTYVNPKTNDLGNISSRPGYSIYNTQTLTLGSDLGKPSGVKNYITDKNGRQVLSYNTSTTTQGS--GYTWGNGAQNGFFAKKGYGLTSSWTVPITGTDTSFTFTPYAARTDRIGINYFNGGGKVVESS-- |
8 | 5iv5I3 | 0.16 | 0.08 | 2.62 | 1.04 | HHsearch | | SDISNVARKEFLVVQGQTDFLDVFRSYNVNNIRVKHRGNGSELVPLDGFNIRLRQPCNIGDTVQIETFMDGVSQ---WRS------------------------------------------------------------------------- |
9 | 3d9xA | 0.13 | 0.10 | 3.39 | 0.76 | SP3 | | -----------------------------GGWNLTVNN-DNNTVVSSGGALDLS---SGSKNLKIVKDGKKNNVTFDVARDLTLKSIKLDGVTLNE------TGLFIANGPQITASG-INAGSQKITGVAEGTDANDAVNFGQLKKIETEVKE |
10 | 5ttaA | 0.08 | 0.08 | 3.12 | 0.58 | PROSPECTOR2 | | NENIPLFINNSDTPYHWPSNVISLTNSSEKAIDYEIDGEVGSVGFSPAGVDYGIVTPVSPKSYSHTYRKQQSPPQDIISFEKQQGKAWVENWLKEWKQEKEYAKQNAIAPDAFLLFDKWKQSTGEVKQVTFNDGSVENWLKSFQNSVLENYYK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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