Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TADTAATQTYNGTAFTLAPPSGVGPGQFINGNGDAATFSTVDNEIDSWWGLGIKSQCCSNYVGYGIVFDARAGSIYTQGNVGIGTTTPGLYPLFVKNSGHWQLLNLQNPSTSPGAAVIQFDRSAATA |
1 | 6beaA1 | 0.13 | 0.13 | 4.35 | 0.75 | SPARKS-K | | DNKITAVTIETSDSDKDLNVTFGGHDITATSTVNQDKVSGNKNVVINATDSTITAQGEGTYVRTAMVIDSTGDVVVNGGNFVAKNEKGSATGISLGNNLTLNTINAQGNKSYSNGSTAIF------- |
2 | 3j0fI1 | 0.17 | 0.15 | 4.94 | 0.39 | FFAS-3D | | ----TLTSPYLGTCSYCHHTVPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASANKYRYMSLKQDHTVKEGTMDDIKISTSGPCRRLSYKGYFLLAK--------CPPGDSVVSIVSSNSA- |
3 | 1ikqA1 | 0.15 | 0.12 | 3.95 | 0.26 | HHpred | | ----------------------LHYSMVLEGGNDALKLADNALSITS-DGLTIRLEGGVPNKPVRYSYTRARGSWSLNWLVPIGHEKPSNIKVFIH-ELNAGNQLSHMSPIYTIEM----GDELL-- |
4 | 1dabA3 | 0.14 | 0.13 | 4.59 | 0.90 | MUSTER | | VLDGWYGVDVSGSSVELAQSIVAPELGAAIRVGRGARVTVPGGSLSAPHGNVIETGFAPQAAPLSITLQ---AGAHAQGKALLYRVLPEPVKLTLTGGADAQGDIVATELPSIPGTSIGPLDVALAS |
5 | 1dabA | 0.18 | 0.13 | 4.37 | 0.81 | CNFpred | | -------------------------GAAIRVGR-GARVTVPGGSLSAPHGNVIETGGAR-AAPLSITLQA---GAHAQGKALLYRVLPEPVKLTLTGGADAQGDIVA-PGTSIGPLDVALASQARWT |
6 | 4a2lA4 | 0.21 | 0.06 | 2.00 | 0.48 | HHsearch-2 | | --------------------------------------------------------------IASTLYR-------QGDQIYIGTSTDGLYTYSIT-QKTFEKITKQI------------------- |
7 | 1dabA3 | 0.15 | 0.14 | 4.80 | 1.07 | Neff-PPAS | | VLDGWYGVDVSGSSVELAQSIVEAPEGAAIRVGRGARVTVPGGSLSAPHGNVIETGGARQAAPLSITLQ---AGAHAQGKALLYRVLPEPVKLTLTGGADAQGDIVATELPSIPGTSIGPLDVALAS |
8 | 5xdmA | 0.11 | 0.06 | 2.01 | 0.45 | HHsearch | | -----------------------------------------------------------PVTKTRLDTPVRSGQIYAPCDLVTSHVSAGA-ELIADGNIHVYGGRALAGAGDRETQCTNLMAELVS- |
9 | 1dabA3 | 0.13 | 0.13 | 4.61 | 0.68 | SP3 | | VLDGWYGVDVSGSSVELAQSIVEAPELIRVGRGARVTVPGGSLSAPHGNVIETGGARRFAPQAAPLSITLQAGAHAQGKALLY-RVLPEPVKLTLTGGADAQGDIVATELPSIPGTSIPLDVALASQ |
10 | 4aq1A5 | 0.10 | 0.09 | 3.47 | 0.60 | PROSPECTOR2 | | VLQDIATSVKLSDEAVGGGEVEGVNQKTIKVQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDN---TIDFDSGNSATDQFVVVATKDKI-------VNGKVEVKYFKNASDTTPTSTKTITVNVVNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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