Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DPTAQMGFQVGQTALKHGTEYVEQNFNRYVNVSALKHYFNVSNGYVVNKLFLVLFPWRHKPWSRKQSVGPSGQEGWFLPPRDDLNSPDMYIPVMALVTYILLSTLLAGLRGAFQPELLGYTASSAFGIVIFEILGLKLGCYLLSISNESQLLDLVAYSGYKFVGIIVTLVISEIINGGKGTGGWAGWTVFGYTFLANAFFLLRSLKYVLLPENSNDSTRGTMHTVARSQRNRRTQFLFLYSYIVQFVFMWALS |
1 | 6ei3A | 0.08 | 0.07 | 2.82 | 0.90 | SPARKS-K | | CMALVLLLAGIGGGTWWQLERARGTHPDAAGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAW-------------FTASQMQALNPLLVMLLIPFNNLVLYWEPTS---LRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHQILPYALLTFGEVLVSATGIEFAYSQA----PPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLS-----EAAFLMFFFAAFAFLAALAFGL |
2 | 6nf6A | 0.07 | 0.06 | 2.29 | 0.92 | FFAS-3D | | --ATNLLLWLLAVTNDSIHMEIESQCKVFQKGYILLYPFNTEYCLICCSVLYVMW-------------------------KNVGRFGPLLGAAAVIIGICVFMMYQIQATGSPNYQVFVLYYSYYIVLLPLMCVVAIIGTIIHTLEKPTRSLDLLMGAALGQIAMSYFSIVAIVATNPRDMLNSLILVLLIFQYITQNIFIIDGL----------------------QWKRKALKEISFFLVLCN-IILWIM- |
3 | 1xioA | 0.12 | 0.06 | 2.25 | 0.23 | HHpred | | ------------------------------------------------------------------------------------YLVAMFIPIWSGLAYMAMAI-----DIAH--------YARYIDWMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIV-VITSGLIADLS-----ERDWVRYLWYICGVCIILWGIWNPLRAKTRTQS-------------SELANDKLVTYFTVLWIGYPI-VWIIG |
4 | 5xjjA1 | 0.10 | 0.09 | 3.36 | 0.80 | MUSTER | | RVTRLAAPMATVTIAQYLLPVISVMVAGHNGVALATSFTNVTGFSIMYGLVGALETL-----GQAYGAKQYEKIGTYT----------YSAIASNIPICFIISIIWFYIEN-GQDPDISRIAGSYAFWLIPVLFAQAIVIPLTRFLLTQGLVLPLLYT--AVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFS-----SSCEKTRGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLFE |
5 | 3rkoB | 0.12 | 0.11 | 3.74 | 1.19 | CNFpred | | AMKAFVVTRVGDVFLAFALFILYNEL-GTLNFREMVELAP-MLMWATLMLLGGAVGLPLQTWLADA-----------------MAGPTPVSALIHAATMVTAGVYLIAR----THGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ--TDIKRVLAYSTMSQIGYMFLALGVQAW-------DAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKS-----IPLVYLCFLVGGAALSALPLVTA |
6 | 1vt4I | 0.13 | 0.13 | 4.37 | 0.55 | HHsearch-2 | | SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQALLELRPAKNNSPETMLQKLLYQIDP----NWTSRSDHSSYEQDHHTLTPDLDCRPQDLPREVLTTNLSIIAESIRDGLATHVNCDKLTTIIESSL--NVLEPAEYRKMFKLHKYQIPSIYLELKVKNEYALHRSIVDHYNIPKFDSLIPPYLDQYFYSHIGH---HLKNIEHPERMTLFRMVFLDFRQKIRHDSTAWNASGSILNT--LQQLKFYK-PYICD |
7 | 5xjjA1 | 0.09 | 0.08 | 3.13 | 0.98 | Neff-PPAS | | -TRLAAPMATVTIAQYLLPVISVMVAGHNGEVALATSFTNVTGFSIMYGLVGALETLCGQAYGAKQ--------------YEKIGTYTYSAIASNIPICFIISIIWFYIENILISRIAGSYAFWLIPVLFAQAIVIPLTRFLLTQG------LVLPLLYTAVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFS------SSCEKTRGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLF |
8 | 1vt4I3 | 0.13 | 0.08 | 2.74 | 0.83 | HHsearch | | NIPERMLFRMVFLDFRFLEQKIRHDSTAWNTLQQLKFYYICDNDPKYERLVNAILDFLPKIEE-------------------NLICSKY--------TDLLRIALMAEDEAIFEEAHK--QVQRGG-----------------GGGGGGGGGGG-G-GGGG----------------GGGGGGGGG----------------------------------G--GGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
9 | 6gs1A2 | 0.09 | 0.09 | 3.28 | 0.88 | SP3 | | -QEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAF---ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQA---LNPFWIIIGSPILAAIYNKMGDTLP---MPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVY------GRVFLQIGVATAVIAVLMLLTA |
10 | 5cwqA | 0.07 | 0.06 | 2.56 | 0.87 | PROSPECTOR2 | | EELER-ESEEAERRLQEARKRSEEARERGDLKELAEALIEE-ARAVQELARVAC----------------------------ERGNSEEAERASEKAQRVLARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCR-------GNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCREAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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