Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DGTISCSDFPSGQGAVSLDWLGLGGWASIMDMNGNTATSCQDGYYCSYACSPGYAKTQWPSEQPSDGRSVGGLYCKNGKLYRSNTDTNSLCVEGQGSAQAVNKVSGSIAICGTDYPGSENMVVPTVVGAGSSQPINVIKEDSYYQWQGKKTSAQYYVNNAGVSVEDGCIWGTEGSGVGNWAPVVLGAGYTDGITYLSIIPNPNNKEAPNFNIKIVATDGSTVNGACSYENGVYSGSGSDGCTV |
1 | 4irtA | 0.09 | 0.09 | 3.30 | 0.75 | SPARKS-K | | VFRNNSLVTHGDEQYISYYDNDGYLVLGKRKLDSEQQGNVKDAHNIISIDGEGYIHVSFD----HHGHPLNYCRSAPGSLELGDKPTGVDEGNVTYPEFYPLSGGDLLFVYRSGSSGRGNLVNRYSLKEHNAYWQLYVDEKSWVWRETWHHDICYARSFDNIKLSNAEYACRLPQNCE--LINQTSSADAGGNPYIATYWRE--PNSDVPQYRIVWNDGKWHQRQITDRQTPFTLKGIPIARP |
2 | 2gsxA2 | 0.14 | 0.14 | 4.61 | 0.46 | FFAS-3D | | --NSSCGEGYKLSGSVYQECQGTIPWFM--EIRLCKEITCPPGTTVTYTCNPGPERGTWSGPAPLFYNDTVTFKCYSGFTLKGSSPEIPVCEAGSRVELVNTSCGHAYQMCQDAENGIWFKKIPLCKVIHVNGKHTGMMAENF----LYGNEVSYECD-QGFYLLGECR--SDSKGHGSWSGPSPQRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSCH-TDNTWVPGVPT-CI- |
3 | 2ahnA | 0.13 | 0.07 | 2.43 | 0.32 | HHpred | | -----------------------------------------------------------------------------------------------ATISFKNNCPYMVWPGTLTSDQKPLSTTGFELASQASFQLDTPVPWNGRFWA--RTGCST--DASGK---FVCATADCASGNGAIPPFNIPA--GGGQDFYDVS------LVDGFNMSVTPQGGDCKTASCPANLQKKGSDSVVACL- |
4 | 3hxjA | 0.19 | 0.18 | 5.84 | 0.72 | MUSTER | | GNSIDSSPILAKNGTIYLGSSNKNGWFEIIECRPSIGKD---GSDKVYA-PDGTEKWRFDTSDFTIFTSDGHLYA-DGRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAIEKWRFKTNDAITSASIGKDGGSDKVYAINPDGTEKWNGYWTVTRPAISEDGVTSLDG-KWRFKTGKRIESSPVIG----NTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATVIDENGTIYFGTRNG-KF |
5 | 1thvA | 0.16 | 0.08 | 2.74 | 0.91 | CNFpred | | -----------------------------------------------------------------------------------------------ATFEIVNRCSYTVWAAASKG-DAALDAGGRQLNSGESWTINVEP-NGGKIWARTD-SGICKTGDC--GGLLRCKRFG--RPPTTLAEFSLNQY---GKDYIDISNI----KGFNVPMDFSPTTRGCRGVRCAADI-------VGQCPA |
6 | 2q7zA | 0.17 | 0.16 | 5.28 | 0.47 | HHsearch-2 | | SSPAPRCQAPDHLFAFSITCLDVGIWSGPA-PQSDNRSLFSLNEVVEFRCQPGFVMKKWEPELPLHAERAASMRCTQGDWSPAAPTCEKSCDDFLLNGRVLFQKGSSASYCVLA--GLWNSSVPVCEQPNGRHT-GKPLEVFP-----FGKAVNYTCDPHGES-TIRCTSD--PQGNGVWSSPPIGPEYGRPFSITCLVWSSPTDIQVGSRINYSCTTGHRLIGECILSTAHWSTKEAPRCAV |
7 | 4fj6A2 | 0.12 | 0.12 | 4.08 | 0.89 | Neff-PPAS | | TDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTHGGNERAWWNSPGTPDETAQLLVKSEWSEPINVKDPSWYFLLQGPGRGIT---QDGTLVF----PIQFIDATRVPNAGIYSKDRGTWHLHNLARTNTTEAQVAEVEPGVLLNRDNRGGSRAVATTKDLGKTWTEHPSSRSALQESVCASLIKVNAKDNITGKDLLLFSNPNTTKGNHITIKASLDGGLTWPTEHQVLLDEAEGWGYSCLSI |
8 | 2ehfA | 0.17 | 0.05 | 1.48 | 0.31 | HHsearch | | SGKGGCGDPGIAYGKRTG-------------------SSFLHGDTLTFECPAAFELVG---------ERV--ITCQNNQWSGNKP----SCSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2ahnA | 0.15 | 0.09 | 2.90 | 1.01 | SP3 | | -----------------------------------------------------------------------------------------------ATISFKNNCPYMVWPGTLTSDQKPQLSTGFELASQASFQLDTPVPWNGRFWAGCSTD------ASGKFVCADCASGQVMNGNGAIPPAEFNIPAGGGQDFYDVSL----VDGFNLPMSVTPQGGDCKTASCPANPSELQKKGSDGSVV |
10 | 4yw0A3 | 0.08 | 0.08 | 3.22 | 0.87 | PROSPECTOR2 | | NAVTGHLIYTANDTTLAFDDFAPVPLEWPREVGGRDLQISGGATYIDDVMPAGVSFREATRKDSVPTNYIAYISSNDHLLPPIMGLNRNAPYLGPGRILIPSYTGKESAFIYSDDNGAVKVVPLPSSWSAEAQFVELSPGVIQAYMRTNNGKIAYLTKDAGTTWSAPEYLKFVSNPSYGTQLSIINYSQLDGKKAVILSTPNSTNGRKHGQIWIGLINDDNDYSNLMFEKFDSWSRNELHMKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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