Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | EHKFFHRAKKVPVTLEEIRGKSGGEKKADKEKNQDKEKEKDKAKDDKKDTDPEGDNGQGEGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGICLFPLWPPLLRKGVYYLSIAAAGFLVFILALTIVRLIVFIIVWALTGGKLHFWIFPNLTEDVGFFASFWPLYESNYNSDANNSSAKTDKKSKSKDK |
1 | 5voxO | 0.05 | 0.05 | 2.29 | 1.10 | SPARKS-K | | LENFQWQTRKFKKSIKDLITLISNSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSSVIAEDAEYVLFNVHFKKNVQEFTTAAREIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPP---------------HFNIKIIAVPPKNLSKCKSELIDAGFLGGN |
2 | 5lnkN1 | 0.15 | 0.06 | 1.85 | 0.65 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------WLLIWIGFEMNMLAIIPIMPRATEASTKYFLTQSTASMLLMMAIIINLLMTMALAMKLGMAPFHFWV-PEVTQGIPLSSG----------------------------- |
3 | 4ry2A | 0.18 | 0.10 | 3.12 | 0.36 | HHpred | | --------------------------------------------------------------------------PGKGIVRYSMEPGEAFQ--KGDYTQNFLKPLKKTVLCIFLASLLYTALGIAG--SFYIKFLFDDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSSIMMEYYSHVLLPMNFFNSRKV-------------------------- |
4 | 6gym0 | 0.13 | 0.11 | 4.00 | 0.85 | MUSTER | | TTDALRRA------TRGANALDERISEVRKVDSQKLQDEYEKLVQGLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRAEHFVSKRLIE----YLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIAVPNPIMRFTCL-------DASIA-----KPVFERFS |
5 | 4he8F | 0.15 | 0.07 | 2.31 | 0.88 | CNFpred | | ------------------------------------------------------------------------------------------------SSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALQDVRKMGGLW------------------------ |
6 | 5ezmA3 | 0.21 | 0.08 | 2.48 | 0.52 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------SPR-SWGKQLIGMAIVAACGLLASPVVATLNAAYAVWVAVAFVMLLGIAVARLLLRVAVYAMGMYLGF------TVALLHETVGRPAS----------------------------- |
7 | 4dvgB1 | 0.09 | 0.08 | 3.12 | 0.89 | Neff-PPAS | | --------VVQQKFAIVAKEKIDNPELITIPNQWKLVQEYEKKQKKDIRIQLNAQKTGNWRNAITDPKYLADLLKTR-----------DDDLLNEVVVFRSSSVSFIKTFVSVGGLANLAIYKKKIEANTAIDEERKCCEVLRYVFAEEDATVALIEIDGGVELLLKGNSKR---ITPDNQLDILLEITLTSSVEHPSQEGDVCVNAFSNLVSEGVD- |
8 | 5ezmA3 | 0.16 | 0.06 | 1.99 | 0.38 | HHsearch | | -----------------------------------------------------------------------------------------------------SPRSW-GKQLIGMAIVAACGLLASPVVATLNRAYAVWVAVAFVMLLGIAVARLLLRVAVYAMGMYLGF---TV---AL----LG-HETVGRPAS----------------------- |
9 | 2qg7D2 | 0.08 | 0.07 | 2.73 | 0.80 | SP3 | | L---LHD---IKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIINTVGDSISFIFEYSCPMERAYDIANHFNEYAWDLTPSKEEEYHFIMHYLGELINQLIREIQPFYICSHINWGLWSLLQGMHS---------SDFDFINYGMTRLTASCLPIFRSKV------------ |
10 | 3ikmA2 | 0.04 | 0.04 | 1.86 | 0.78 | PROSPECTOR2 | | ASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARACLQKLKGTTELLPKRPQHLPGPRLDDPAWTPGPSLLSLQMRVALTWDGFPLHYSERHGWGYLVPGRRDNL-----------------AKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQ------------EAAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDQAGPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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