Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| Seq | WLGIVVSAVCLWIALRGLDFQTFWQVMRQANYWWLVPGVGVYFLAVWARTWRWHYMLRHLAPVPVSRLFPIVVIGYMGNNVYPARAGEVLRSYVLKRKENVPISASLATVVLERLFDGLVMLLFVFVTLPFAPLPPVYSSLVTILSLLFLTALAAFLALAARPTHMSRAYAWIVDRFVPERFRATVHGLFDRFVEGLQSLRSPRDLALIFMSSTLIWLTETGKYWFVMHAFPFETSFLVLMLMTAVVNLFTTLPSTPGYIGTFHVPGIAVLMAFNVDQAVATSYTVVLHVALWLPITTLG |
1 | 6cc4A | 0.08 | 0.08 | 3.03 | 1.13 | SPARKS-K | | GLLTLALAVVTVAGMLAAPIMVTAPGFADFALTSQLLKITFPYILLISLASLVGAILNTWNR--FSIPAFAPTLLNISMIGFALFAA---------PYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFGPAILGVSVSQISLIINTIFASFLASWMYYADRLMEFPSLGVALGTILLPSLSKSFAEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGLMTQRALIAYSVGLIGLIVVKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLY |
2 | 3m71A | 0.09 | 0.08 | 3.05 | 1.40 | FFAS-3D | | YFGIPLGLAALSLAWFHLEARMVSDVLGIVASAVWILFILMYAYFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLF-----STLRVSELWQGGVFEQKSTHPSFYLP----AVAANFTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGI---------VLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQL-FFLLRLFPWIVEKGLNIGLWAFSFGLASMAN--------------SATAFYHGNVLQGVSIFAFVFSNVMIGLLVLMTI- |
3 | 3rkoB | 0.06 | 0.06 | 2.46 | 1.36 | CNFpred | | FAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIAMKAFVVTRVGDVFLAFALFILGTLNFREMVEL-MLMWATLMLLGGAVGKSAQQTWLADAM--AGPTPVSALIHAATMVTAGVYLIARTHGLFLM----TPEVLHLVGIVGAVTLLLAGFAALV---QTDIKRVLAYS---------TMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE-SIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIV |
4 | 4n7wA | 0.10 | 0.08 | 3.13 | 1.05 | Neff-PPAS | | PYVGPLLMLIMFAMGVTLRLDDFKRVLS--RPAPVAAATFLHYLIMPLTAWILAMLFRMP---------PDLSAGMVLVGSVASGTASNVMIYLAK-------GDVALSVTISAVSTLVGVFATPLLTRLYVDATISVDVVGMLKSILQIVVIPITAGLVI-HHTFTKTVKRIEPYLPAMSMVCILAIISAVVAGSQSHIA--SVGFVVIIAVILHNGIGLLSGYWGGKLFGFDESTCRTLAIEVGMQN-------------SGLAATLGKIYFS---PLAALPGALFSVWHNLSGSLLA |
5 | 4r0cA | 0.09 | 0.09 | 3.42 | 1.09 | PROSPECTOR2 | | FVWFCLLLLPLTAVLGALDFTTLVGNFTGFAPLGVVLVAMLGLGVALLSVSLASLVRRSSGGALVFTVAFAGVLSSLTVDAGYVVLIPLAGLVF--QLAGRPPIAGIATAFAAWFIIASTFLVTGLVTLITGSVLGSPFIHGLVVIVALIAGICGAVYGRVSGQFRNSGAVITAMEVTMASMAGYLLLLAVKGAAWLGALTVPKVVLLLLFVASAKWSILAPVFIPMLMLLGISPEASQAAYRVGDSSTNIITP--LMPYFVLVLGFARRYQPETGIGTLISLTLLLGWSVLLGVWIGFG |
6 | 4bwzA | 0.11 | 0.10 | 3.61 | 1.09 | SPARKS-K | | FLAELGAVFLLFMVGLETRLKDILAV--------GKEAFLVAVLGVALPFLGGYLYGLEIG-FETLPALFLGTALVAT---------SVGITARVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLIAPL--------ERLPVGSPLGFALALGVGMAALAASIGL-APIVGAFLGGMLAIESFLAPIFFAMVGVRLELSATVVTVIAILGKVLGGFLGAMAPRGEVGLIVAALGLKAGVNEEEYAIVLFMVVFTTLFAPFALK |
7 | 3zuxA | 0.12 | 0.10 | 3.67 | 1.38 | FFAS-3D | | -IPWLLGIIMFGMGL-TLKPSDFDILFK--HPKVVIIGVIAQFAIMPATAWCLSKLL---------NLPAEIAVGVILVGCCPGGT----ASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA----GEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI--MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEV-------------GMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLA- |
8 | 3rkoC | 0.08 | 0.08 | 3.02 | 1.36 | CNFpred | | LMVVLTGLLGVLAVLCS-YQGFFHLNLMWILGGVIGVFLALFFFFWEMMLVPMYFLIALWGHKRITAATKFFIYTQASGLVM---LIAILALVFVHYNATGVWTFNYEELL-VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA-SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-------SQLAYQGAVIQMIAHGLSAA---GLFILCGQLYERIHTRDMRMMGGLWMKWLPALSLFFAVATLG |
9 | 3zuxA | 0.12 | 0.10 | 3.68 | 1.05 | Neff-PPAS | | PYIPWLLGIIMFGMGLTLKPSDFDILFKH--PKVVIIGVIAQFAIMPATAWCLSKLLNLP---------AEIAVGVILVGCCPGGTASNVMTYLAR-------GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG-SKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIM--ESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGM-------------QNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLAT |
10 | 3wajA1 | 0.05 | 0.05 | 2.44 | 1.04 | PROSPECTOR2 | | SVLVIAALISVKLRILNPWNSRLIENTIHNFESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAGQFLQRSILGFNDHHIWEAFWHDLTARQMAYPVIAGITGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGPEMALLIWAIAMFIALWGQYYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTGPNKQWYDALTWMRWDYGHWIEAVAH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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