Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SSDRNPPPFPAAEEPEAGLCDMADGDSDEGEDIFVSNSNPVAVSRGVSQPDHVSEEPPDLFSEEETINTTAKSNGVHSDDDNDLFGEAHVELSTDKPGSSGRKELSASSGPRPASSFAQSPASMEPTSLEQLEEE |
1 | 5jcss | 0.06 | 0.06 | 2.56 | 1.17 | SPARKS-K | | SRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDEEPIEESLAAVIPISHLGEVGKWNNVLNCTEYSEKKIAE--RLYVFITFLTDMGVLEKINNLYK---- |
2 | 6ic4A | 0.09 | 0.08 | 3.09 | 1.46 | Neff-PPAS | | -------TLDPVTRLATVTFDLDGKLTSFNAEQLKEVQKNALDELRYSSDYTQATPAQQKTMEQQLISNMNSITSIDED--------AYIMVATNGLLGEKYLKIVPGGGLNYLKRGDTISNTQGTMDLEDLISK |
3 | 1zlgA | 0.06 | 0.06 | 2.56 | 1.09 | SPARKS-K | | TVQPIRPKSHSKAEAVFFTTPPCSALKGKS------HKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRL |
4 | 2rdoL | 0.09 | 0.09 | 3.35 | 0.48 | FFAS-3D | | -NTLSPAEGSKKAGKRLGRGIGSGLGKTGGR-----GHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAALAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAIEE- |
5 | 4k36A | 0.19 | 0.10 | 3.35 | 0.28 | HHpred | | -----------------------------GHSFFQG-GEPTLAGLEFF------EKLMELQ-RKHNNYNSLQTNGTLIDESAKFLSENLVGLSMDGPKENLNRKDCCGLDT------------------------ |
6 | 2cseW | 0.15 | 0.15 | 4.99 | 0.98 | MUSTER | | TSNREARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVD-GSNQKPMSTRIAEATSAIVSKHPAYQCHVCSAVLFSPLDLDAH |
7 | 6c04D | 0.12 | 0.04 | 1.58 | 0.43 | CNFpred | | ------------------------------------------------------------------------------------YFAAYVITSVDEEMRHNELSTLEAEMAVERKAVEDQRDGELEARAQKLEAD |
8 | 4rasA | 0.12 | 0.11 | 3.92 | 0.43 | HHsearch-2 | | LAGVLVAPFLRRGRLGVVTGYALAADRPLAPEVMLGIDGTEEEKRPMETIR-RVDEPTTLVVRQEIQRV---------AKRGDFFKRAEGDLG-EKAKQEKKRFPMKHPLAQPLILQGEKLGKGDLSDPGRNAEA |
9 | 6r24A | 0.10 | 0.10 | 3.57 | 1.37 | Neff-PPAS | | ----DSHKLKNFISEIMLNMSMISWPNDLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGILNQRFRKIWDRMPPDFMTEKAAIMTTRLLTKETYNIVRMHKPETLKDAMEE |
10 | 4uuzC | 0.23 | 0.08 | 2.56 | 0.42 | HHsearch | | -----------------------------GEELIGDGMERDY--R---------AIPED----------AYEAEGLALDDDEELTASQRAERAMRQ--RD----------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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