Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GYLPKWIFFISVVAIFNSLQTYTNLSLTKKVYAGKPEEVTPLSARTFGTWTLVSSIIRAYAAYNITNVHVYNLCIVSYVIALWHFGSEWLIFKTCKFDKGLFGPLIVST |
1 | 2x1gF2 | 0.06 | 0.06 | 2.44 | 0.96 | SPARKS-K | | -CCAPTLEISKTAIVMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKVLEDKTLAYDRLVFYAQRGMIRNSIQFLTHFVMQSRNHAHVTEVVLA---- |
2 | 4qndA | 0.10 | 0.08 | 3.09 | 0.75 | FFAS-3D | | ALIERIGKALEPLMLVMGLISPLAMPQLYKLYVSHSEHALGLSLTTWLLYSFIALLWTIY-GIYHKNPTIWVGNCLGFLMYVAMVVGIIAHTGGT-------------- |
3 | 5tj5A | 0.13 | 0.10 | 3.49 | 0.23 | HHpred | | SYLRLWALSLAHAQLSSVL---WTMTIQ-IAFGFR-GFVGVMTVALFAMWFALTCAVLVL--ME---------GTSAMLHSLRLHWVESMS-K-------PYEPFAF-- |
4 | 4qndA | 0.11 | 0.09 | 3.35 | 1.05 | MUSTER | | ALIERIGKALEPLMLVMGLISPLAMPQLYKLYVSHSEHALGLSLTTWLLYSFIALLWTIYGIY-HKNPTIWVGNCLGFLMYVAMVVGIIAHTGGTY------------- |
5 | 5xtcr | 0.06 | 0.05 | 1.96 | 0.83 | CNFpred | | KHMAYPFLVLSLWGMIMTSSICLR---------------QTDLKSLIAYSSISHMALVVTAILIQFTGAVILMIAHGLTSSLLFCLANSNYERT--------------- |
6 | 5tj5A | 0.13 | 0.10 | 3.50 | 0.66 | HHsearch-2 | | SYLRLWALSLAHAQLSSVL---WTMTIQ-IAFGFR-GFVGVMTVALFAMWFALTCAVLVL--ME---------GTSAMLHSLRLHWVESMS-K-------PYEPFAFEY |
7 | 3nxcA2 | 0.06 | 0.06 | 2.42 | 0.78 | Neff-PPAS | | -------TTARLRLIVLLLLGFGERNPGLTRILTGHARLQGRINQLFERIEAQLRQVLREKRMREGGYATDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPL |
8 | 2kixA | 0.15 | 0.05 | 1.54 | 0.37 | HHsearch | | -----------------------------------------------------------------MLEPFQILSISSFILSALHFIAWTIG-HLNQIKR---------- |
9 | 6nbqC | 0.11 | 0.09 | 3.32 | 0.78 | SP3 | | -----GYEYFLGFLIICSLVPVLALAASALLGAWIQFNVRYMFALVFVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKRALEW------------ |
10 | 5ezmA3 | 0.08 | 0.07 | 2.88 | 0.53 | PROSPECTOR2 | | SPRSWGKQLIGMAIVAACG-----LLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRP------AS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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