Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MGNLKTLLESRFKKSSQEKMDTLTRQRMNGELSPLLSRFSTPELSPKEEEKFRQLLENYTCDDQISEEDFHNLCCLSAQIKQIHHQAVLLHGERIKKVRDLLKNYREGAFSSWLLLTYGNRQTPYNFLVYYELFSALPDPLKIEVEKMPRQAIYTLAARQGSQEQKEAIIRNYRGESKGELLDIIRKTFPLVATDRRQTCLSRQAFSLLSKGLQLLKKCPELSSEDCLDLDKLIKKM |
1 | 5cwiA | 0.12 | 0.10 | 3.46 | 0.72 | SPARKS-K | | ------------------------------------DIEKLCKKAESEAREARSKAEELRQRHPDSQ-AARDAQKLASQAEEAVKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLSQAAEAVKLACELAQEHPNDIAKLCIKAASEAAEAASKAAEDSQAARDAIKLASQEAVKLACELAQEH-PNADIAKKCIKAASEAAEEASKAAEEAQRHPD-SQKARDEIKEASQKA |
2 | 3pmrA | 0.14 | 0.10 | 3.48 | 1.06 | FFAS-3D | | -----LRAKMDLEERRMRQINEVMREWAMAD-------NQSKNLPKADRQALNEHFQ-------------SILQTLEEQVSGERQRLVETHATRV---IALINDQRRAALEGFLAALQADPPQAERVL----------LALRRYLRAEQKEQRHTLRH----YQHVAAVDPEKAQQMRFQVHTHLQ-----------------VIEERVNQSLGLLDQNPHLAQELRPQIQELLH-- |
3 | 4uetA | 0.16 | 0.09 | 3.08 | 0.33 | HHpred | | --------------------------HSSGHMFKYEDIMPLQNLSDGDKTVLKEVFKA-GPY-KNTEESIAALK----------KKSPE-LGAKVEKLHAMVK----------------------------SKIAALGPEAKGFAEKSIEIARGIKARYEPTKDDVKEVLKLYKAMSD-AGKADFGKQFPFLAKVFESGK-AAKFA------------------------------- |
4 | 5nnvA | 0.09 | 0.08 | 3.23 | 0.82 | MUSTER | | AKEEELAESSAISA-KEAKIEDTRDKIQALDVDELQQVL--LVT-SEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVK--QLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELAL---KEAKEDLSFLTSESSSTSGEEKLEEAA---KHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKT |
5 | 3nd2A | 0.10 | 0.09 | 3.45 | 0.69 | CNFpred | | SASISTFVMDKLGQTMSVDENQLTLEDAQS-----------QELQSNILTVLAAVIRKSPSVEPVADMLMGLFFRLLEKSAFIEDDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQVDSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFG-PYLNDIMALCVAAQNTKPALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQV |
6 | 1vt4I3 | 0.10 | 0.06 | 2.31 | 0.73 | HHsearch-2 | | ------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQY--FYSHI-----GHHLKNIEHPERMTLFRMVFL---DFRFLEQKIRHDSTALNTLQQLKFYKPYICD------NDPKYERLVN-----------------------AILDFLPKIEEN----LICSK--------YTDLLRIALM-AEDEAIFEEAHKQVQRGG |
7 | 5nnvA | 0.09 | 0.08 | 3.23 | 0.95 | Neff-PPAS | | ---KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQ--LRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES------SSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKT |
8 | 2w9yA | 0.14 | 0.07 | 2.46 | 0.50 | HHsearch | | -----------------------GAMSVASLPE-VKNFFPSSSITADEKPVLHEVFQKHSC-----GEMIDEV----------SKKHPE-LGKRLATVLEGNK----------------------------KRLDGLSPAAVEYAKKLIHMVTTTLCSKPIDDADAKRLHQEFQSLSS-EDQAALRKNNPDIKF------------------------------------------- |
9 | 3i9yA | 0.10 | 0.09 | 3.46 | 0.64 | SP3 | | ---SAMIEARQV-SELSTRIISSVQMLSN--AQNEQERKEAGRVLFEQLESLLTHIKELGGESFD-SKLLDALESNVQNVINNLAELGVTVERKLWLAKEIDTRVEE--MRLLSEELEQLTRTLDLTERLHELHLLA-FKMLNQIEEARTTNVDRIQQIQTAFENNLKIMKRRVLAEDPTRSKQMSQLLTELGKRQVVFTILLQQYENNEQSQQLMQKTLELFSELNSTVNKLVDDS |
10 | 2yfaA | 0.09 | 0.08 | 2.92 | 0.84 | PROSPECTOR2 | | IGQLNKDLTDMIANGDDTAAANTLAKAFSKQQAYLATTFK----SPENVKLLGEL-----------GDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQA-----MDALSQEVMARPEADSVRLAQYQLI----SKARQQLLQVRIDVRGYIA--ENSSANEQAALRQL-----DAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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