Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LLNTLVFETLGQPEKEREFKIKSLKKWGFDLVFGKKDGVETYFAASEKQAGDKYTENDVEHEVIEVLKELPKNKKMFAKIEMIEGRAYLYVYLREDDIDTPVLHVPAGELLIAFLKKHKFVHIIEAIRNIGSAASLVKKHGDEGKPLPFEELPPVPRRFLRDAKKIEKEMGFGRVALAYFGENKSGDARYWMEWMVPTIALFDEKISEKIDKALAEFK |
1 | 2ia2A | 0.12 | 0.11 | 3.88 | 0.65 | SPARKS-K | | RTLSDVARATDLTRATARRFLLTLVELGY---VATDGS--AFWLTRVLELGYSYLSSLSLPEVQPHLEKLSHKVHESSSVSILDGDIVYVARVPVSRITVGITRLPSGRVLLAGLPD---DELDAYLEKLDI-------------QRLTERTITARDELKAAILAVRADVLDQELRSAAPIRGASGLTVAAVNISTPALIPSLRVTATDIEQDLATVN |
2 | 2g7uA | 0.14 | 0.12 | 4.22 | 0.64 | FFAS-3D | | -----LATEAGLSRPAVRRILLTLQKLGY----VAGSGGRWSLTPRVLSIGQHYSESHALIEAAPRLLEVAEKTQESASLGVLDGADVVYAARVPVRRTRVPAYATSGRALLAWAPADVVERVVAE----------------STFQKLGPETIGTAAELERELAKVREQ-GFGLISLAAPVHDAGGTVVGVVACSTSSARNTPAQFREQAVPCVLA-- |
3 | 5un7A1 | 0.14 | 0.07 | 2.34 | 0.33 | HHpred | | -------------------------------------------RAKLSKPRRLFQ--------------SV-KYVFVMTFTLDDGTGVLEAYLMDS---DKFFQIPASEVLMDDDLQKSVDMIMDMFCPPG--------IK------------------------IDAYPWLECFIKSYNVTNGTNQICYQIFDTTVA-------------------- |
4 | 5umfA | 0.11 | 0.10 | 3.50 | 0.61 | MUSTER | | YR-SILSADFARLGEE----VANVIAAGADIHFDVMDNH----YVPNLTFGPMV--------CAALKPYA--SVPIDVHLMVEPVDDLIQ-SFAKAGASIITFASRHIDRSLSLIRDMGCQAGVYVLENVLDRLDMVLNPGFGGQSFI-PHTLEKIRQVRAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVAADTFVAGSAIFG-DYKAVIAAMRAELE |
5 | 5hpfA | 0.13 | 0.08 | 2.84 | 0.60 | CNFpred | | ---------------------------------------------------------------NLLCAQT---SLTFSIVVLDEHEVVPVARSYL-GNRLPAHATSTGKVLLSVLDREVQIEWIEKYG----------------LKRLTPYTITDEHTFLETLDAVRQSD-LGVIAIAVPVLNAQGLTIAALNCMSQTNRVQPQYLIDQVLPLLRNTA |
6 | 5e4wC1 | 0.15 | 0.04 | 1.23 | 0.35 | HHsearch-2 | | -------------------------------------------------------QVFEYAEVDEIVEKR----------GKGKDVEYLVRWKDG-GDCEKGVHV-AEDVAKDYEDGLEY-------------------------------------------------------------------------------------------------- |
7 | 2o9cA | 0.08 | 0.08 | 3.07 | 0.56 | Neff-PPAS | | ------LPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEPTEAWDSTGPHRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPTPLGGAVLRATSPMHMQYLRNMGVSSLSVSVVVGGQHQTPYVLPPDLRTTLESLGRLLSLQVQVKEAH-- |
8 | 5un7A1 | 0.14 | 0.09 | 2.99 | 0.39 | HHsearch | | --LSATILTD--HQYLERTPLCAILKQ-------KAPQQYR-IRAKLSKPRRLFQ--------------SV-KYVFVMTFTLDDGTGVLEAYLMDS---DKFFQIPASEVLMDDDLQKSVDMIMDMFCPPG--------IK------------------------IDAYPWLECFIKSYNVTNGTNQICYQIFDTTVA---EDV-------------- |
9 | 5umfA | 0.09 | 0.08 | 3.14 | 0.54 | SP3 | | IAPSILSADFARLGEE----VANVIAAGADIHFDVMDNH----YVPNLTFGPM--------VCAALKPYA--SVPIDVHLMVEPVDDLIQ-SFAKAGASIITFASRHIDRSLSLIRDMGCQAGVYVLENVLDRLDMVLNPGFGGQSFI-PHTLEKIRQVRAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARTFVAGSAIFGKPDYKAVIAAMRAELE |
10 | 3p24A1 | 0.08 | 0.06 | 2.20 | 0.71 | PROSPECTOR2 | | PVTASI-DLQSVSYTDLATQLNDVSDFGKMIIL--KDNGFNRQVHVSMDKRTKIQLDNENVRLFNGRDKDS--------TNFILGDEFAVLRFYRNGESISYIAYKEAQMMNEIA-------------------EFYAAPFKKTRAINEKEA----------------------FECIYDSRTRSAGKYPVSVKIN----------VDKAKKILNLPE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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