Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | IVVALLGGAVAGFFIARNYFKKYLEKNPPINEQMIRAMMSQMGRKPSEKQVRQVMASMKQ |
1 | 2p6jA | 0.14 | 0.12 | 3.98 | 0.93 | SPARKS-K | | --------MKQWSENVEEKLKEFVKRHQRITQEELHQYAQRLG--LNEEAIRQFFEEFEQ |
2 | 5unkA | 0.18 | 0.13 | 4.33 | 0.57 | FFAS-3D | | ---------------DERTLVRKVQINPRTTAKDLVKMLEETGTKVSISTVKRVLYRHN- |
3 | 3ox5A | 0.19 | 0.15 | 4.85 | 0.41 | HHpred | | ------------IEELREAFREFDKDKDYINCRDLGNCMRTMGYMPTEMELIELSQQINM |
4 | 2f2pA | 0.12 | 0.12 | 4.15 | 0.61 | MUSTER | | LTMMARKMKDTDSEEEIREAFRVFDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAID |
5 | 4kq8A | 0.12 | 0.08 | 2.97 | 0.49 | CNFpred | | CILEMLIAAPDTMSVSLFFMLFLIAKHPNVEE-----------------AIIKEIQTVIG |
6 | 4oy4A | 0.20 | 0.18 | 5.87 | 0.45 | HHsearch-2 | | ---QLTEEQIAEFKEAFSLFDK--DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA |
7 | 5unkA | 0.17 | 0.13 | 4.37 | 0.75 | Neff-PPAS | | --------------RDERTLVRKVQINPRTTAKDLVKMLEETGTKVSISTVKRVLYRHNL |
8 | 5vt9A1 | 0.10 | 0.08 | 3.05 | 0.44 | HHsearch | | ---------MVEADEMYARFN--ARASGKVSTGDAMILARQLGLAPSYADKQAFEEKSG- |
9 | 5fmfR | 0.16 | 0.13 | 4.45 | 0.62 | SP3 | | ----LLKFVVRGFYGSFVLVLDAILFHSVLAEDDLKQLLS-----INKTELGPLIARLRS |
10 | 2r18A2 | 0.10 | 0.10 | 3.70 | 0.40 | PROSPECTOR2 | | EKSRLASEEQILRAATSIYGAPGQAEPPQAFIDEVAKVYEINHGRGPMKDLLLTAMEMKH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|