Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MSGPNGDLGMPVEAGAEGEDDGFGEAEYAAINSMLDQINSCLDHLEEKNDHLHARLQELLESNRQTRLEFQQQLGEAPSDASP |
1 | 1wrdA | 0.10 | 0.10 | 3.55 | 0.77 | SPARKS-K | | LEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQLTEELLIVNDNLNNVFLRHERFERFRTG---- |
2 | 2dnxA | 0.21 | 0.16 | 4.98 | 0.65 | FFAS-3D | | -------------SGSSGQLRDF-SSIIQTCSGNIQRISQATAQIKNLSSKLQENLQQLQHSTNQLAKETNELLKE------- |
3 | 2gd7A | 0.14 | 0.14 | 4.90 | 0.33 | HHpred | | GAMAGDGSEFLQRDFSEESLQNMSIKEYLELEKCLSRMEDENNRLRARVRELELELDRLRAENLQLLTENELHRQQERAPLSK |
4 | 4rsiB | 0.17 | 0.17 | 5.52 | 0.82 | MUSTER | | MSGGGNHVAKGL---MKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASE |
5 | 4aurA | 0.10 | 0.07 | 2.66 | 0.47 | CNFpred | | ------------------------IQRVTLASRHLDELNTFVEKNDEDMHRFSNDIKQSRIEVKRLAGELFEELNLMEKQLMS |
6 | 3hrnA | 0.15 | 0.11 | 3.67 | 0.45 | HHsearch-2 | | ---------------------GVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDERL |
7 | 2tmaA2 | 0.13 | 0.11 | 3.78 | 0.83 | Neff-PPAS | | -----------QAEKYSQKEDKY-EEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALND |
8 | 2pnvA | 0.15 | 0.07 | 2.42 | 0.62 | HHsearch | | ---------------------NIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALP----------------------- |
9 | 2w6aA | 0.18 | 0.13 | 4.31 | 0.84 | SP3 | | ---------------GPLGDGAVTLQEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQP------- |
10 | 4bjmA1 | 0.10 | 0.10 | 3.60 | 0.56 | PROSPECTOR2 | | QPEFDRGFLRPFGAKMKFLKQKLSTDDLITYMAEKDKRDLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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