>PF03659 (383 residues) VFAHVVVGNTAAHTQSTWQNDITLAHNAGIDAFALNIATPDSNTAPQVANAFAAAKALNN GFKLFFSFDYLGGGQPWPATGSNSVVSYLTQYKNSGVYFYYNGLPFASTFEGTNNINDWA PGGPIRSGAGDVYFVPDWTSLGPSGVASHSANIQGAFSWDMWPAGANDMTTTPDQQWVSA LAGKSYMMGVSPWFFHSASGGTDWVWRGDDLWAQRWQQVLQINPAFVEIVTWNDFAESHY IGPVYTTSEIAAGSSTYVNNMPHESWRDFLPYYIAMYKKSTFNISRDQMQYWYRTAPAAG GSTCGVVGNNPGWQTTMSPNSIVQDKVFFSALLMSPATVTVQIGNYAAVSYNGVQGINHW SQPFNGQTGSVKFSVVRNGATVK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VFAHVVVGNTAAHTQSTWQNDITLAHNAGIDAFALNIATPDSNTAPQVANAFAAAKALNNGFKLFFSFDYLGGGQPWPATGSNSVVSYLTQYKNSGVYFYYNGLPFASTFEGTNNINDWAPGGPIRSGAGDVYFVPDWTSLGPSGVASHSANIQGAFSWDMWPAGANDMTTTPDQQWVSALAGKSYMMGVSPWFFHSASGGTDWVWRGDDLWAQRWQQVLQINPAFVEIVTWNDFAESHYIGPVYTTSEIAAGSSTYVNNMPHESWRDFLPYYIAMYKKSTFNISRDQMQYWYRTAPAAGGSTCGVVGNNPGWQTTMSPNSIVQDKVFFSALLMSPATVTVQIGNYAAVSYNGVQGINHWSQPFNGQTGSVKFSVVRNGATVK | |||||||||||||||||||
1 | 4ad1A | 0.14 | 0.10 | 3.40 | 1.78 | SPARKS-K | IASNFYLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADKK--KIKVCFHLEPYPSRNV--QNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYIEPSEWEKLLTIRNTAYDALMIGLWTSSPTVQRPFILAHFDGFYTYFAATGFTYGSTPTNWVSMQKWAKEKIFIPSVGPGYIDTRIRPWNRTRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVP-YTSSEFTYLDYENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
2 | 4ad1A | 0.11 | 0.08 | 2.89 | 2.26 | FFAS-3D | ------LGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDEEAKRIGLILDAADKKKIKVCFHL----EPYPSRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLIEPSEGSITIRNTAYDALMIGLWTSSPTVQRPFILNAHFDGFYTYFAATGFTYGSTPTNWVSMQKWANGKIFIPSVGPGYIDTRIRPWNGSRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYTSSEFTYLDY-ENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
3 | 4ad1A | 0.15 | 0.11 | 3.67 | 4.07 | HHpred | --FYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADK--KKIKVCFHLEPYPS--RNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLEPSEWEKLSTIRNTAYDALMIGLWTSSPTVQRPILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKE-NGKIFIPSVGPGYIDTIRPWSVIRTTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYT---SSEFTYLDNREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 5bx9A | 0.10 | 0.09 | 3.30 | 1.02 | Neff-PPAS | KDFLGVNAQFLWFSPERYNKQIDRLQDLGLEWVRLDLHWDDQYQLASLDQLVKDLEARQ--LKSVFYLVGSAFQDQYPPRDPEVFARRMAMLSQR-----YPSVAAWQVWNEPNLIGFWRP-------KADPEGYAKLLQASTIALRMVDPEKPVVSAGMAFFSEMPDGRTMFDALGHLGVESLGTIATYHP-YTQLPEGNYPWNLDFVSHANQINRALRNAGVPAIWSTEWGWSA--------------YKGPKELQDIIGVEGQADYVLRRLALMSALDY-----DRIFLFTLSDLDQRASVRDRDGPKLRPADPPVTEDLPDGSFSIGWTREDGRNVWLFWSARGGNVRLPKLKEATLHDPL--SGKVTPLSGSDGLEVP | |||||||||||||
5 | 4ad1A | 0.16 | 0.11 | 3.75 | 1.61 | MUSTER | NF-YPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADKKK--IKVCFHLEPY--PSRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLIPSEWEKLLTIRNTAYDALMIGLWTSSPTVQRPFILAHFDGFYTYFAFTYGSTPTNWVSMQKWAKEN-GKIFIPSVGPGYIDTRIRPWNIRTRDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYTSSEFTYLDY-ENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 4ad1A | 0.15 | 0.10 | 3.53 | 2.37 | CNFpred | --FYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADKK--KIKVCFHLEPYPSRNV--QNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYIEPSEWEKLLTIRNTAYDALMIGLWTSSPTVQRPFLNAHFDGFYTYFAATGFSTPTNWVSMQKWAKEN-GKIFIPSVGPGYIDTIRPWNIRTRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPY---TSSEFTYLDYREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 5bx9A | 0.09 | 0.08 | 2.92 | 1.22 | PROSPECTOR2 | HMEIQVLKAPRAFSPERYNKQIDRLQDLGLEWVRLDLHWEDQYQLASLDQLVKDLEA--RQLKSVFYLFYSPFQDQYPPRDPEVFARRMAMLSQ-----RYPSVAAWQVWRPKADPEGYAKLIALRMVDPEKPVVFFSEMPDGRTMFDALGHLGTYHPYTQLPEGNYPWNLDFVSHANQINGVPAIWSTWSAYKGPKELQDIIGVEGQADYVLRRLALMSALDYDRIFLFTLSDLDQR-------ASVRDRDYGLLDLDANPKPVYLAL-QRFLKVTPPVTEDLPDGSFSIGWTR---------------------------EDGRNVWLFWSARGGNVRLP-KLKEATLHDPLSG-KVTPLS---GSDGLEVPVKSSLQMLV | |||||||||||||
8 | 4ad1A | 0.16 | 0.11 | 3.74 | 3.27 | HHsearch-2 | SNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADK--KKIKVCFHLEPYP--SRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLEPSEWEKLSTIRNTAYDALMIGLWTSSPTQRPFILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKE-NGKIFIPSVGPGYIDTRRPWSVIRTRDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYT---SSEFTYLDNREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 4ad1A | 0.15 | 0.11 | 3.61 | 2.00 | Neff-PPAS | SNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEDETEAKRIGLILDAADKKK--IKVCFHLEP--YPSRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLIPSEWEKLLTIRNTAYDALMIGLWTSSPVQRPFILNAHFDGFYTYFAATGFTYGSTPTNWVSMQKWAKGKIFIPSVGPGYIDTRIRPWNRTRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYTSSEFTYLDY-ENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 4ad1A | 0.15 | 0.11 | 3.67 | 4.32 | HHsearch | SNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADK--KKIKVCFHLEPYP--SRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLEPSEWEKLSTIRNTAYDALMIGLWTSSPTVQRFILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKE-NGKIFIPSVGPGYIDTRRPWSVIRTTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYT---SSEFTYLDNREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |