>PF03594 (378 residues) QDWSLSATIAGFLAVLISYSGPLIIFFQAAQKAHVSTEMMISWIWAISIGAAVTGIFLSI RFKTPVVTAWSAPGTALLVTLFPNISLNEAVAAYITAAIVIFLVGITGYFDKLLKWIPQG IAAGMMAGILFQFGLGLFLATDTLPLIVFSMLLCYLISRRFSPRYCMLWVLICGVAFSFF LGKMNPVPLDFQIARPQFIAPEWSWFSTLNLALPLILVSLTGQFLPGMAILKLSGYNTPA KPIITAASLASLFAAFAGGITIVLASITATLCMGKDAHELKDKRYIAGIANGLFYILGGV FAGSIVALFSLLPKELVAALAGLALLGAIASNIKIAMQEDQQRDPALITFLATVSGMHFL GLSSVFWGMCIGMLAYFI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QDWSLSATIAGFLAVLISYSGPLIIFFQAAQKAHVSTEMMISWIWAISIGAAVTGIFLSIRFKTPVVTAWSAPGTALLVTLFPNISLNEAVAAYITAAIVIFLVGITGYFDKLLKWIPQGIAAGMMAGILFQFGLGLFLATDTLPLIVFSMLLCYLISRRFSPRYCMLWVLICGVAFSFFLGKMNPVPLDFQIARPQFIAPEWSWFSTLNLALPLILVSLTGQFLPGMAILKLSGYNTPAKPIITAASLASLFAAFAGGITIVLASITATLCMGKDAHELKDKRYIAGIANGLFYILGGVFAGSIVALFSLLPKELVAALAGLALLGAIASNIKIAMQEDQQRDPALITFLATVSGMHFLGLSSVFWGMCIGMLAYFI | |||||||||||||||||||
1 | 5da0A | 0.13 | 0.12 | 4.07 | 3.09 | SPARKS-K | FANPRKDVLAGIVVALAL----IPEAIAFSIIAGVDP-------QVGLYASFIIALITAFLGGRPGMIAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFWQMYAMVAAGLAIIYLLPLVFKMPSALVAIVVLTVVAVVTGADVKTMGTLPTALPHFQFPQVPLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMI-----GQSMINVTSGGRGRLSTFVAGAFLMVLILAL---QPLLVQIPMAALVAVMMVVAISTFDW------GSLFPKGETVVMLATVAVTVFTHD---LSLGVLIGVVLSAL | |||||||||||||
2 | 3qe7A | 0.14 | 0.13 | 4.59 | 3.16 | FFAS-3D | RAIGVQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLFIGKIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLTIIISITTLAVTVLGSVFLAIIPILIGVLVGYALSFAMGIVDTTPIINAFALPTLYTPRFEWFAILTI-LPAALVVIAEHVGHLVVTANIVKKDLLRHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAIT-----RVYSTWVIGGAAIFAILLSCV-GKLAAAIQMIPLPVMGGVS-LLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIAELKGMALATIVGIGLSLI | |||||||||||||
3 | 3qe7A | 0.15 | 0.14 | 4.81 | 3.45 | HHpred | RPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINPA-------TVLLFNGIGTLLYLFKGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLTIIISITTLAVTVLGSVLFAIIPILIGVLVGYALSFAMGIVDTTPIAHWFALPTLYTPRFEWFAILTILPAALVVIAEHGHLVVTANIVKKDRDPGLHRSMFANGLSTVISGFFGSTPNTTYG----ENIGVMAITRVYSTW-VIGGAAIFAILLSCV-GKLAAAIQMIPLPVMGG-VSLLLYGVIGASGIRVLIKVNKAQNLILTSVILIIGVSGAKLKGMALATIVGIGLSLI | |||||||||||||
4 | 3qe7A | 0.13 | 0.13 | 4.38 | 1.92 | MUSTER | RPPLLQTIPLSLQHLFAMFGATVLVPVLF----HIN-------PATVLLFNGIGTLLYLFICKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDPPAAMGAIVAVIGLELAGVAAGMASKTIIISITTLAVTVLGSVLFRGIPILIGVLVGYALSFAMGIVDTTPIAHWFALPTLYTPRFE-WFAILTILPAALVVIAEHVGHLVVTANIVKKDLGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMA-----ITRVYSTWVIGGAAIFAILLSCV-GKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKNKAQNLILTSVILIIGVSGAKVNAELKGMALATIVGIG | |||||||||||||
5 | 5xlsA | 0.14 | 0.13 | 4.59 | 2.25 | CNFpred | RPPLLQTIPLSLQHLFAMFGATVLVPVLFHI-------NPATVLLFNGIGTLLYLFIC--KGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAG-TIIISITTLAVTVLGSVLFAIIPILIGVLVGYALSFAMGIVDTTPIAHWFALPTLYTPRFEW-FAILTILPAALVVIAEHVGHLVVTANIVKKDLGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVY------STWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLVIGASGIRVLIESKVDNKAQNLILTSVILIIGVSG-ELKGMALATIVGIGLSLI | |||||||||||||
6 | 5da0A | 0.14 | 0.13 | 4.35 | 2.73 | HHsearch-2 | FANPRKDVLAGIVVALALI----PEAIAFSIIAGVDPQVG-------LYASFIIALITAFLGGRPGMIAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFVQMYAMVAAGLAIIYLLPLVFKAPSALVAIVVLTVVAVVTGADVKTDGTLPTALPHFQFPQVPFAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMI-----GQSMINVTSGGRGRLSTFVAGAFLMVLILAL---QPLLVQIPMAALVAVMMVVAIST-----FD-WGSRFPKGETVVML-ATVAVTVFHD---LSLGVLIGVVLSAL | |||||||||||||
7 | 3qe7A | 0.14 | 0.13 | 4.52 | 2.38 | Neff-PPAS | RPPLLQTIPLSLQHLFAMFGATVLVPVLF----HIN-------PATVLLFNGIGTLLYLFICKIPAYLGSSFAFISPVLLLLPL-GYEVALGGFIMCGVLFCLVSFIVGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLSITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINWFALPTLYTPRFE-WFAILTILPAALVVIAEHVGHLVVTANIVKKDLLLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYS------TWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGV-SLLLYGVIGASGIRVLIESKKAQNLILTSVILIIGVSGAKLKGMALATIVGIGLSLI | |||||||||||||
8 | 5da0A | 0.14 | 0.13 | 4.42 | 4.18 | HHsearch | FANPRKDVLAGIVVALALI----PEAIAFSIIAGVDPQVG-------LYASFIIALITAFLGGRPGMIAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFVQMYAMVAAGLAIIYLLPLVFKAPSALVAIVVLTVVAVVTGADVKTMGTLPTALPHFQFPQVPFAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMI-----GQSMINVTSGGRGRLSTFVAGAFLMVLILAL---QPLLVQIPMAALVAVMMVVAIST-----FD-WGSRFPKGETVV-MLATVAVTVFHD---LSLGVLIGVVLSA- | |||||||||||||
9 | 5da0A | 0.13 | 0.12 | 4.14 | 2.31 | PROSPECTOR2 | QANPRKDVLAGIVVALALI----PEAIAFSIIAGVDPQVG-------LYASFIIALITAFLGGRPGMIAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGMYAMVAAGLAIIYLLPLVFKAPSALVAIVVLTVVAVVTGADVKTMGTLPTALPHFQFPQVPLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIG-----QSMINVTSGGRGRLSTFVAGAFLMVLILA---LQPLLVQIPMAALVAVMMVVAISTFDWG-----SLRFPKGETVVMLATVAVTVFTHD---LSLGVLIGVVLSAL | |||||||||||||
10 | 5da0A | 0.12 | 0.11 | 3.99 | 2.76 | SAM | -ANPRKDVLAGIVVALALI----PEAIAFSIIAGVDPQVG-------LYASFIIALITAFLGGRPGMISATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFVQMYAMVAAGLAIIYLLPLVFKAPSALVAIVVLTVVAVVTGADVKTVGTLPTALPHFQFPQVPLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMI-----GQSMINVTSGGRGRLSTFVAGAFLMVLILA---LQPLLVQIPMAALVAVMMVVAISTFDWGSLRF-----PKGETVVMLATVAVTVFTHD---LSLGVLIGVVLS-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |