Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | KAGDSANTKDSTDDNHLSPSRWKWARKALSETSSNKSYENKYQEVSQKDSHEQLNNTSSSPQHLSAHKLEMLYNEITKTTQPHSHLNASDYQEQAEKPPVYKEEIEMEEVVCPQEQLAVAQTEVIMDMRSTSSIDSFTSCATDFTETERSPLPPYASTHLQMRFPPDPTGAEEHQRAKGLPFLTLTREKSSAPRDATFEYTPIDTTGSPDSVVPPLGLHGPLQFDSATESPKSSLKGSNPLKSRSLKVNFKESRGSAPQTPPSTARPLPVTTMADFTLPTPQHISTILLEE |
1 | 5jcss | 0.08 | 0.08 | 3.01 | 1.42 | SPARKS-K | | SDIDSMGYEQVDLTRQISYITEELTNIVREIISMNMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKMSMNIEKMTEIITKEASVLILDNANLCSPSLINECSQEDGQPRVLKPHPNFLTMDPKYGELSRIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDE--EPIEESLAAVIPISHLGEVGKWA-NNVCTEYSEKKIAERLYVFITFLTDMGVLEKINNLYK------ |
2 | 6fmlG | 0.11 | 0.11 | 3.93 | 1.23 | MUSTER | | DLFERADTSSPFFCGHFA-ETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFV-------DTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEA--SFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDS |
3 | 2bsgA | 0.07 | 0.07 | 2.95 | 2.78 | Neff-PPAS | | KNGEEILGADTQYGSEGSMNRPTVSKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREENEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGY |
4 | 2nbiA1 | 0.08 | 0.08 | 3.12 | 1.40 | PROSPECTOR2 | | QPSDLNPSSQPSECADVLEEPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAP---TR |
5 | 4nl6A | 0.11 | 0.10 | 3.45 | 1.16 | SPARKS-K | | RGTGQSDDSDIWDDTALASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNLQQWKVGDKCSAI-----WSEDGCIYPATIASIDFKRETYTGYGNREEQNLSLLSPICEVANNIEQNAQENENESQ--------------VSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDA--------------DALGSMLITGYYMGFRQNQKEGRCSHSLN----------- |
6 | 4bmlA | 0.07 | 0.07 | 2.66 | 0.58 | FFAS-3D | | RGGKSKQFTGKLSAGYHTPGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSATHYDEIARVLAKASAEASPVEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDY---------QVDASALAGLIFHREAAGCIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMGCGSLRTSVAGS---FQAA------------------ |
7 | 5fxuA | 0.15 | 0.11 | 3.68 | 0.36 | HHpred | | ------LESSCNFDLHTSTSKWTWEMKS-------TSFQTKSSEINLRG-------LCLVPPLV----IETAA-RTRKTIACFDLNQ-TACQPTVLGLGDQRIQVNYEKTYCVSGQLVEG--VCFNPVHTMASYDIVTVMVRCFLIAKKVST----GDSMKL-------EKSFETLVQKTSCTGNGFQGYLVGSSSEPLYIPTLD---------------DYRSAEVLSRMAFAPHGEDAMRII-GKVTGK---------APSTESSDTIQ-------------------- |
8 | 6etxG | 0.07 | 0.07 | 2.93 | 1.21 | MUSTER | | RQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFP-----EPAGGLWSIRPQNGWSFIRIPGKESLITDSG-YALDVLLTR |
9 | 2pffB | 0.13 | 0.12 | 4.15 | 0.67 | HHsearch-2 | | KTKELIIMAKRPFDKKSNSALFRAVGEGN--------AQLVAIFGGQGNTDDYFEELLYQTYHVLVGDLETLLIRTTLDAEFTGLNILEWLENPSDTPGELRSYLKGAT-------------GHSQGLVTAVATDSWERCYEAYPNTS---LPPSLEDSLENNEGVPSPMLSISNLTQEQ-VQDYNKTNSHLPAGKQVEISLVNGAKNLVVDQSRPFSERKLKFSNPVASPFHSHLLKDLVKN---NVSFNAKDIQIPVYDTFDGSDLRVLSGSISWETTTQFKATHILDI |
10 | 3cnfT | 0.07 | 0.07 | 2.95 | 2.76 | Neff-PPAS | | -PLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGTT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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