Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KSMGDLEVAPFVAAAKKKFTANEAEEKAIEFVCQVIDKLGNPEWHPFKIIKVGQKHKEIIDEEDHCLKTIKSEWGNEAYEAVVTALMEMNEYNPSGRFAVPELWNYEEGRRATLGECVELFE |
1 | 5cwcA2 | 0.16 | 0.11 | 3.83 | 0.83 | SPARKS-K | | LELAIRLIKECVENAQREYDISEACRAAAEAFKRVAEAAKRAGI----------TSSETLKRAIEEIRKRVEEAQREISEACRQAAEEFRKKAEELKRR----------------------- |
2 | 4oydB | 0.13 | 0.11 | 3.72 | 0.60 | FFAS-3D | | ------DPKKVLDKAK-----DQAENRVRELKQKLEELYKEAR--------KLDLTQEMRRKLELRYIAAMLMAIGDIYNAIRQAKQEADKLKKAGLVNSQQLDELKRRLEELKEEASRKAR |
3 | 4ri8A | 0.16 | 0.13 | 4.34 | 0.30 | HHpred | | ----DLCTDSFFEARLQLIHDAPEESLRAWVAATWHEQEVASSWDRFT--------------SLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGG-LPDLVVWNSQSRH-FKLVEV----- |
4 | 3vwbA | 0.10 | 0.09 | 3.31 | 0.66 | MUSTER | | ----EHSGIGLNFLKVSGMSYKDIAKKERAKVTRAFQAASVPQ----EIISLFPIASELNFNDYKILFNYYKGLEKA--ESLSSTLPILKEEIKDLDTNLP-----PDIYKKEILNIIKKSK |
5 | 3fe1A | 0.11 | 0.10 | 3.52 | 0.49 | CNFpred | | -------VNHFMEEFRRKH-NKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLD-----AQIHDVVLVG---STRIPKVQKLLQ |
6 | 3f9rA2 | 0.19 | 0.08 | 2.66 | 0.33 | HHsearch-2 | | --------------------------------------------------------------------SLLNALGNDRIVKFVKKTLRLIADLQRGTFVENGMINVSIGRNCSQAERDEFEV |
7 | 3mvpA | 0.13 | 0.12 | 4.26 | 0.60 | Neff-PPAS | | KRYNDFFLTTIFADINSQDSLDRFKKNPKEWLNVLINQLLAAEDKIFHAQIE-------LAYAIPQAKALLEEHNNNLKNLTYKCLLYYSDQAANPSSALVDELLYHEHTQEEAHQIKKTGI |
8 | 5lkbA1 | 0.17 | 0.14 | 4.59 | 0.64 | HHsearch | | KRRETISKPIYK-PAKGRYWACPWAHRTLITRAL--KGLTEKGWR-FLDFLKNDSQRATNEYGYKRIS--------DLYYK--------SDPQYSARFTVPVLWDLETQTIVNNEEIIRIL- |
9 | 4p8qA3 | 0.11 | 0.09 | 3.24 | 0.75 | SP3 | | -------TFMEYFSLEKIFKELSSYEDFLDARFKTMKKDSLNSSHPISSSVQSSEQIEEMFDSLSLLLMLKTYLSEDVFQHAVVLYLHNHS-----------------YASIQSDDLWDSFN |
10 | 5eqzA | 0.07 | 0.07 | 2.66 | 0.49 | PROSPECTOR2 | | HHHYVEEKKEIDSLMEDNDSSGGKFKDYKDKINELKENLKDIGNAELK-------------EKLLNLQNSFQDKLAAKLAALKAAKNTIENITDKDQDVGVTVPLLGSNTSGNGDKMSKNAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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