Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DGINTEQRLLERRKAASERERLKQEVEDMVNLHQCKRGIFCVVKQAKLTYEKTTTGNRLSYKLPTQRQKLVLMVGEKPITVTQHSAETEGCLHFPYQGPEDLCTLIKTMCGIRDLIP |
1 | 4wkkA3 | 0.09 | 0.09 | 3.27 | 0.94 | SPARKS-K | | -SAEKLMGELTSLAKYLLEDALFRTAQLVSSISGHDRTLIYDFWSGHVVAEAGSGALP---SYLGLRFPARLRMIPASMSVSIVVNGAWGLIACHHATPEACDFAAQLLSMRIAMEQ |
2 | 3q5zA1 | 0.14 | 0.13 | 4.37 | 0.62 | FFAS-3D | | -GDSFMRDLLKREEELIGYCREEAAMVEAVTATVWPQN-----AETTVDSLLSQGERKLKLV-----EPLRVGDRSVVFLVRDVERLEDFALKVFTMSRSELERLHEATFARRLLLP |
3 | 5hy7A2 | 0.15 | 0.09 | 2.86 | 0.24 | HHpred | | ------------------------------------PSSLLIMSMETLYLHILHSGVYLRTVLDEITDTRQKFLGPKPTKLFQVTVQNQTCVLALSSRPWL---------------- |
4 | 1lc7A2 | 0.11 | 0.10 | 3.68 | 0.75 | MUSTER | | -GISPDQLLSANAWQQATWHWLREEGARFYQALCQLPLLTVY----------PGRANYLLLRCEREDIDLQRRLLTQRILIRSYPGLDSRYYRVAIRSAAQNERLLAALRNVLTGIA |
5 | 5nj5B | 0.14 | 0.11 | 3.82 | 0.73 | CNFpred | | ------------SQVEAQRKILEEAVSTALELASG------KSDGAEVAVSKT---TGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTS |
6 | 5lusA | 0.24 | 0.04 | 1.33 | 0.48 | HHsearch-2 | | ------------------------------------------------------------------------------------------------HMEQQLYAVMDDICKLVDAIP |
7 | 1lc7A2 | 0.08 | 0.07 | 2.68 | 0.89 | Neff-PPAS | | ---------SANAWQQATWHWLREEGARFYQALCQLPLLTVY----------PGRANYLLLRCEREDIDLQRRLLTQRILIRSCANLDSRYYRVAIRSAAQNERLLAALRNVLTGIA |
8 | 4f98A | 0.13 | 0.06 | 2.09 | 0.35 | HHsearch | | ------------KDPGREEYHYQLDVKNV--LHRTDNSTRTGVVPVTVVYEDSGELHKIRFLEWGGSTS------------------------------------------------ |
9 | 1lc7A2 | 0.11 | 0.09 | 3.41 | 0.70 | SP3 | | DFSANAWQQATWHWLREEGARFYQALCQL-------PLLTVYPGRAYLLLRCEREDIDLQRRL--LTQRILIRSCANY------PGLDSRYYRVAIRSAAQNERLLAALRNVLTGIA |
10 | 3q5zA1 | 0.12 | 0.11 | 3.91 | 0.51 | PROSPECTOR2 | | AGDSFMRDLLKREEELIGYCREEAAMVEAVTATVWPQNA-------ETTVDSLLSQGERKLK----LVEPLRVGDRSVVLVRDVERLEDFALKVFTMSRSELERLHEATFAAARLLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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