Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MKNNYTSLKSPLDEEDELKTDHEIDLEKGPLPEYDSEEEGALPPYSDHALVNNPPNTHRENNPSRSTDNSSPFLIKLLISFTPIYVLNVLAICYLTYKDAFFKDYGAAEWTLFGFWCLVCTLALIFLTYFYETWVKAVKVTVISLAKCVKVISIGLFNIRREMMIIIWILWLIICCILFVYIKSGDLILNKALICSTCTISAVLLLIVSSVCIPFWTFERTLAKLAKVLLLQSGIVLV |
1 | 5tsiA | 0.10 | 0.10 | 3.72 | 0.90 | SPARKS-K | | YIYVATSESLLAMGFFRGLPFVHTTITISKKLHQKMLHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSIVRYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIMSLKGLWTIRATATWFLYLSTLRWFLFRADILFVFFFTLAAWIAVGQDKPGEIGIIICLAMILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSESSWP |
2 | 5azdA | 0.13 | 0.09 | 3.21 | 0.98 | FFAS-3D | | -------------------------------------------------------------------ELSFGEYWLVFNMLSLTIAGMLAAFVFFLLARSYVAPRYHIALYLSALIVFIAGYHYLRIFYRYADWLLTVPLLLLELILVVLMLALGYVGPRTLWGALSSIPFFYILYVLWVELGQAIREAKFGPRVLELLGATRLVLLMSWGFYPIYALIQIGYSLADLIAPIYGLLV- |
3 | 6e59A | 0.13 | 0.09 | 3.06 | 0.25 | HHpred | | ---------------------------------------------------------------------PAWVLWAAAYTVIVVVVGNV-VVMWIILAHKRMR--TVTNYFLVNLMAAFNTVVNFTYAVHNEWYCKFHNFFAVAFDRYMAIIQPRLATATKVVICVIWVLALLLAFPQGYYSTT--ETMPSRVVCMIEEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEGI--- |
4 | 6d4hA1 | 0.09 | 0.09 | 3.49 | 0.74 | MUSTER | | TNFDPLEFLEELKKINYQVDSWEEMLNRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLVALSVAAGLGLCSLIISF-NAATTQVLPFLALGV-DVFLLA |
5 | 3rkoB | 0.09 | 0.06 | 2.25 | 0.95 | CNFpred | | -------------------------------------------------------------------------LMWATLMLLGGAVGKSAQLPLQTWLADAMAGTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQIKRVLAYSTMSQIGYMFLALGVQA-----WDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLR---KSIPLV |
6 | 2pffB | 0.13 | 0.13 | 4.35 | 0.79 | HHsearch-2 | | MDASTRPLTLSHGSLEHVLVPTASFLEHALAAKLLQENDTTLVKTKELINYIMAKDAVGEGNAQLVQGNTDDELRDLYQTYHVLVGDLIKFSELIRAEKVFLENPSNTPDKDLLSIPISCPLIGVIQLAHYVVTAKLLGVTAVAIAET--DSWESFFVSVRKAITVLF-FIGVRCYEAYPNTSLDSLENNEGVPSPMLSISN----------LTQEQVQDYVNKTNSHLPAGKQVSLV |
7 | 3o7pA2 | 0.09 | 0.07 | 2.70 | 0.97 | Neff-PPAS | | ------------------------------------------------------QSDNHSDAKQGSFSAIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAIPTAELIPALCFAVIFI |
8 | 1vt4I3 | 0.11 | 0.08 | 2.75 | 0.98 | HHsearch | | ----EYALHRSIVDHY-------------NIPKTFD-SDDLIPPYLDQYHLKNIEEQKRHDS---TAWNASGSILNTLQ-------QLKFYKPYICDNDPKY------ERL----VNAILDFLPKIEENICSKYTDLLRIA---L----MAEDEAIFEEAHKQVQR---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-G-GGG-GG-----GGGGGGGG- |
9 | 6cc4A | 0.07 | 0.07 | 2.82 | 0.69 | SP3 | | VKDALTKMRAAALDKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFA |
10 | 5cwpA | 0.09 | 0.08 | 3.08 | 1.04 | PROSPECTOR2 | | MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSS-----------------SDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAREKARERVREAVERAEEVQRDPSGWLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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