Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | FCTVTGRLCVIGSQIDYPIMVDEIQRRAMKPEGLVRSHIGPLLKRGKVKGTGDALLKLLEPYAIDINEPSINRKRYPLTTLTALLEGESVQFSVDHREIIKNNFPFTPLARMMVRTIGSPDKLRCAMVEAHGARQGVEAFMSVLTEWTAGGWVAGKERILASPMKTFAMATHALGVEECLLIANIYHRFLQC |
1 | 6egcA | 0.11 | 0.08 | 2.84 | 0.67 | SPARKS-K | | ---------------TRTEIIRELERSLREQEELALKELLRELERLQREGSSD---------------------------------EDVRELLREIKELVEEIEKLAREQKYLVEELKGNEIIRELERSLREQEELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEILAREQKYLVEELKRQ--- |
2 | 5ic0A2 | 0.13 | 0.10 | 3.46 | 0.84 | FFAS-3D | | -----GQLECETAIAALNSCLRDLDQQLAPREGISQEALHTQMLTA-----VQEISHLIEP-------------------LASAARAEASQLGHKVSQMAQY---FEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGNPKQAAHTQEALEEAV--------QMMTEAVEDLTTTLN- |
3 | 1xsdA | 0.10 | 0.06 | 2.29 | 0.26 | HHpred | | -------------NKQVEISMAEVMNIIWDKKSVSANEIVVEIQKEVSDKTIRTLITRLYKKEIIKRYKSENIYFY-----SSNIK-EDDIKMKTAKTFLNKLYGGKSLVLNFAKEELNNKEIEELRDI-------LNDISK-------------------------------------------------- |
4 | 2z6bA | 0.12 | 0.12 | 4.23 | 0.64 | MUSTER | | INPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDIGHLIMKQPVRDMAQINKVLSKQVGREITGNPGSITMEEATTLFERDLADMQRDIKKVGPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAG-DWEKAYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLLAMAATV |
5 | 2qmrA | 0.12 | 0.09 | 3.14 | 0.61 | CNFpred | | --------------------LPLLKELLFHVKESGILVLGAIAEGCMQGMYLPELIPHLIQCLSD----------------KALVRSITCWTLSRYAHWVVSQPYLKPLMTELLKRILDS-NKRVQEAACSAFATLEEEACTELV------------PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADS |
6 | 1vt4I3 | 0.11 | 0.06 | 2.08 | 0.64 | HHsearch-2 | | --------------------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSDDFYSHIGHHLKNIEH-PERMTLF---RMVFLDFRFLEQKIRHDSWNASGSITLLKFYKPYICDNDPKYERLVNAILDFLPKIEEN |
7 | 5cwmA | 0.10 | 0.09 | 3.28 | 0.70 | Neff-PPAS | | --------------------PEDELKRVEKLVK-EAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELADPEVARRAVELVKRVAEL |
8 | 2e7iA2 | 0.20 | 0.09 | 2.84 | 0.45 | HHsearch | | MEKL-GIKQLGDNPHNHDLM------FFH------A---EVLYEISKAKGGRFFLYRELKSRKIHGIKP-GLTRYFKLSTY-GLSDEEVDYVLNAFKEIIEKYS---------------------------------------------------------------------------------------- |
9 | 3uboA | 0.09 | 0.08 | 3.03 | 0.70 | SP3 | | IARCDDSFENGIIKGANLINADRAELLYSRGPAAGVASLGAYF----GKVAGEIFTHDIRAQGVHFQTK--PLDGHPPTARSIFVTEDSNTYLGACVELGPEDVEDDVVAQYFEGYLWDPPR----------AKDAIREAARIAHAHGRETATLSDSFCVHRYRSEFLELRSGYETEDFDRALELLARDCKL |
10 | 5cwmA | 0.11 | 0.11 | 3.94 | 0.67 | PROSPECTOR2 | | --DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEAREAKKVLEQAEKEGDPEVALRAVERVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEAER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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