Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TQQRWQHYLDEVTPYTTNRWIATGVLVVIYAIRVLVAQGWYIVTYALGIYLLNLFLAFLQPKFDPSLEMDIQESEVEEGPALPTKNDEEFRPFIRRLPEFKFWYSATRAIVIAFFCTLFSIFDVPVFWPILLVYFCILFYITMKRQIKHMIKYRYVPFNVGKKSY |
1 | 3c2hB3 | 0.14 | 0.12 | 3.91 | 1.01 | SPARKS-K | | VIYSGTGFLSNVVAHVKDIAIRAIFLLHTIISKYPRLDELVCEIICNCLRTLNNFLMMWIPT-------------PNGTKTAGPNEKQQVCKFIE--------IDILKKLMSCLSC---EGMDTPG---------LLELRSTILRSFILLLRTPFVPKDENRKEN |
2 | 1orrA | 0.11 | 0.10 | 3.48 | 1.04 | SP3 | | GQVAMTTSIDN--PCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG----------DLEQYKYNETETRYTCVDKPNGYDESTQLDFHS--------PYGCSKGAADQYMLDYARIFGLNT---VVFRHSSMYWVGWFCQKAVEIKNGINKPFTIGKQVR |
3 | 6ei3A | 0.10 | 0.09 | 3.36 | 0.99 | SPARKS-K | | IGGGTWWQLERAGVRALLRVLVIFALVTPFFSLFDQKAS-TWVLQGFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWE---------------PTSLRRMTSGIAFSGVAWIAVGAIQVAMDHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVM |
4 | 5z1fA | 0.12 | 0.10 | 3.44 | 0.71 | FFAS-3D | | -----QSHAIRAASGKYFYFSVFNVFIGVTLAGTLPKSATFFLTYVALKFFIGYGLELS--RIIPLIIFHLKKK--------YLCKTEAEVKEAWYPGDLSYATRVPGDMLILTITFCYSVI-APLILIFGITYFGLGWLVL-----RNQALKVYVP-------- |
5 | 5d92D3 | 0.13 | 0.09 | 3.15 | 0.23 | HHpred | | -GAFLDSYLDRVG-----DSSVFTGIVIWFF-----LGGANPTIAILALLVLSSLVSYSKARAE-----G-------LGL--T----ANVGIA----------ERSERLVVVLVATGLVGLGIPSWVLLVVLIVLAIASVVTIFQRVLTVREQA----------- |
6 | 5v7pA2 | 0.16 | 0.13 | 4.42 | 0.95 | MUSTER | | -------------NHSPQYTIAAVSSWVEFFIETYFFPGLKLSNIGLCVCILGEVLRKTAILTAGSNFNHLVQCEKSSDHVLVTHG---YA-WFR----PSYVGWFYWSIGTQIILIN------PLCIPAYTLASWMFFKERIYIEESMLLSF-YIPFIEGYKI- |
7 | 3rkoB | 0.11 | 0.08 | 2.84 | 0.96 | CNFpred | | -----QTWLADAMPTPVSALIHAATMVTAGVYLIARTHGLFLMTVLHLVGIVGAVTLLLAG------------------------------FAALVQTDIKRVLAYSTMSQIGYMFLALGVQ--AWDAAIFHLMTHAFFKALLFLASGSVILAC----------- |
8 | 1vt4I | 0.12 | 0.10 | 3.67 | 0.69 | HHsearch-2 | | LSIIAESIRDGLATHVNCDKLTTIIESSLNVLRMFDRLSVDVIKSDV-MVVVNKLHKYLVEKQESTISLKLENEIVDHYNIPKTFDSDDLIP--PYLDQYFY--SHIGHHLKNIEHPERMTLFRMVF---LDFRF-----------LEQKIRHDSTAWNASGSIL |
9 | 5v7pA2 | 0.12 | 0.10 | 3.64 | 0.72 | Neff-PPAS | | -----------SPQYTIAAVSSWVEFFIETYFFPGLKEIHWLSNIGLCVCILGEVLRKTAILTAGSNFNHLVQCEKSSDHVLVTH------------GVYAWFRHPSYVGWFYWSIGTQIILINPLCIPAYTLASWMFFKERIYIEESMLLSFFGIPFIEGYKI- |
10 | 3x38A | 0.08 | 0.04 | 1.42 | 0.32 | HHsearch | | ------------------------------------------------------------------KR-LQFNETLS----KLILGGLRLRGISNSITDYQLYKITFDAAEFTHRDELKRIMGSEVSFES------------LQETVETLLKFT--K---S---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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