Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALL |
1 | 5eqwA | 0.14 | 0.12 | 4.05 | 0.84 | SPARKS-K | | ---------DYAGGVLAILTQYFNNVGYPLAGEEANSREGINQKEIVHRRASEPIRQGRGFHDAYVYFAS----VPENAPPNSAQSEVQAKLT |
2 | 1v74B | 0.12 | 0.10 | 3.45 | 0.46 | FFAS-3D | | MN-KMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNILNCGEE------LFMAAERFEPDA-------DRANYEIDDNGLKVEV- |
3 | 2r18A | 0.15 | 0.11 | 3.60 | 0.25 | HHpred | | ------------------ISKKM-ETMGIFATPEWVALNGHRGPSPGQLKYWQNTR--------EIPDPNEDYYVHAEKSRLASEEQILRAA- |
4 | 5yfpE1 | 0.15 | 0.13 | 4.34 | 0.90 | MUSTER | | ------SLYELDPKWKKLLKTDNFLGGLTVQELSKDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQDP-----KPESTLKE--LKNLNEETL |
5 | 2zzeA | 0.13 | 0.08 | 2.59 | 0.60 | CNFpred | | ------HTKALTFMLADGVVPSNVMAGYLARLLIRK-----------------------------------SIRHLRELGLEVPLSEIVALHI |
6 | 2gq3A | 0.16 | 0.15 | 5.03 | 0.62 | HHsearch-2 | | MVRKTMKSQPWILAYEDHNVDAGLAAGFSGR-AQVGKGMWTMTE-LMADMVETKIAPRAGASTAWVPSPT-AATLHALHYHQVDVAAVQQGLA |
7 | 1zelB3 | 0.14 | 0.10 | 3.32 | 0.75 | Neff-PPAS | | ---------------------------TSAWQRASYLLDSGGEPARGQALLAKRHTEVMPVTRFTTAHSGESVWAPEYQLVDELVVPLLRVIG |
8 | 3ushA | 0.27 | 0.11 | 3.30 | 0.53 | HHsearch | | ----------------------------------------------------SQNVGGVLRACS---DPETGFYRDGHCRTGRDTGSHTEAF- |
9 | 5yjcA1 | 0.14 | 0.09 | 2.95 | 0.78 | SP3 | | ----INILSFREAMIRSQILGLIDNYDYEGALNLVSNQKSFRNGKLLRKKLLSLTKQIKTHE------------------------------- |
10 | 5oh5A1 | 0.08 | 0.08 | 3.02 | 0.44 | PROSPECTOR2 | | MAKNKEFFDALEEIAESAKNDETLRNELAKVLDDILKTDPSDPEAFRKIVADEHDPSLMEFNEGRFFGKLKSDDFLNSTDPTYNFQKLHQF-A |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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