Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SMVGIIQENGGWFEVKSISSLDGFDYVTEIICANGEIYNDDGMGDDYFELSEEEFYCFREYKEPTSEEDEVKDKVSGVTKIHCIVDENNVDEIIELLRKTFKK |
1 | 1kafA | 0.18 | 0.16 | 5.06 | 0.93 | SPARKS-K | | LMLKLLDKNG--FVLKKVEIYRSNYLAILEKRTNGI---------RNFEINNNNMRIFGYMMEHTDIGMSCKIAKNGNVYLDIKRSAENIEAVITVASEL--- |
2 | 1xuvA | 0.17 | 0.16 | 5.09 | 0.53 | FFAS-3D | | --------RGFTTALKIFEPKNGGSWQYIQKDPEGNEYAFHG---VNHDVTEPERIISTFEFEGLPEKGHVEALPGDRTKLTSHSVFQTIEDSYERLDELLEK |
3 | 4dgkA | 0.18 | 0.17 | 5.39 | 0.32 | HHpred | | GMIKLFQDLGGEVVVSHMETTGN--KIEAVHLEDGRRFLTQASNVLYFGLNHEDFSLY--LHAPC-VTDSSL-APEGCGSYYVLAANLDRDRIFAYLEHYMP- |
4 | 1kafA | 0.16 | 0.14 | 4.52 | 0.74 | MUSTER | | LMLKLLDKNG--FVLKKVEIYRSNYLAILEKRTNG----------RNFEINNNNMRIFGYKMMEHHIQKSCKIAKNGNVYLDIKRSAENIEAVITVASEL--- |
5 | 1kafA | 0.16 | 0.14 | 4.52 | 0.64 | CNFpred | | LMLKLLDKN--GFVLKKVEIYRSNYLAILEKRTN---------GIRNFEINNNGNMRIFGYKMMEHHIQKFTDI-NGNVYLDIKRSAENIEAVITVASEL--- |
6 | 6d7yA | 0.22 | 0.10 | 3.06 | 0.36 | HHsearch-2 | | KHFKEIVRAPGEFRP--TNEK--GITFLEKRLIDGVRLNLDG-----------TFKGFID------------------------------------------- |
7 | 2b30A2 | 0.13 | 0.11 | 3.69 | 0.79 | Neff-PPAS | | ELISYLVEKNL---VNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEML-----------------KYRTMNKLMIVLDPSESKTVIGNLKQKFKN |
8 | 3mgjA | 0.20 | 0.10 | 3.10 | 0.52 | HHsearch | | KVFDKILD-GGDYKVLEFEIGKDPSYAKLVIGRDERHVD----------------------------------------------------EILNELRDLIP- |
9 | 1pj6A | 0.16 | 0.16 | 5.17 | 0.65 | SP3 | | LLIKRTESAGVTYRVTGIEQSGG--RVTGVQTADGQGRNDQPNGARLPILRHDQDLYYREHGDRPMPVDVDTLGAYAPETVSEHHMPSTLEDFLPAWEATKQL |
10 | 5t86A | 0.09 | 0.08 | 2.95 | 0.44 | PROSPECTOR2 | | QILDLVGNLGADSKPVIGRLEVSAGNVIGRQSSDGKVGW-------RVDYDPEKGTHINIWDYSQG------KGPGKAVKQVIPFEGN--EKSFETILKQLNR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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