Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWT |
1 | 4mi7A | 0.13 | 0.08 | 2.60 | 0.77 | SPARKS-K | | ------------------------------------GIDIIECENLLKEMNVQPESSLFTNIKEALQ------AEVFNSTVEDDFESFISYELQNHGP---LMLIRPSSEC---LHAECIVGYDSEVK---------------------------KVLIYDSNTSPE--------------WQSNIDVYDKLTLAFNCSICGLYYDGVYEP-- |
2 | 4v1ai | 0.12 | 0.10 | 3.47 | 0.49 | FFAS-3D | | -FVEHARKAGLVIPIHLACTAGIFDAYVPAQRAERLKKSQLSIRKIRESFKIKDFPEKAKDIFIEAHLC---LNNSDHTLVTENCFP--DMVWDIRYKTVRWSFVESLEPP----QVVQVRCSSLMNQGNIYG-------QVTVRMH----TRQTLAIMYGQEDVPRDVLEYVVFEKHLGSW------RMHGKIIPPWAP------------- |
3 | 4qanA2 | 0.12 | 0.09 | 3.12 | 0.66 | MUSTER | | --------------------PISEKT--PQRAVEQFIYAIEKLTRALAFATTEDTSKKQGEYAKELKTLYGFLGTEDARLYGKSEEQLNKLRGKL-------------NPEYVYLDLIKVIPIETEENTETVKQ------YAGLYSYN-GKNYLTGYTLCRQEDG----------------WQIQSLSAPALSLESGEVRL---TSEQSVLKA |
4 | 4guzA | 0.08 | 0.07 | 2.55 | 0.61 | CNFpred | | ---------------------------LQRGHVLNIKWE--NLDAVLHKHVAL---DIPAVQAKLLRSP-------RGGYCY-EHVALFGAVLQRLGFDFYGIQGRVQ-IRPATHGMLVVRLA----AEQWLCDVGF-DESWTYRLRRGEGADGWTLSEAAGDGEPGWLSRHTFVLEPQYPIDYRAASYFVASSP--TRAFVQQISPDHAYIL |
5 | 6bq1A | 0.13 | 0.12 | 4.08 | 0.32 | HHsearch-2 | | LFSAEIKEADASEA--SQP-KPCPPEVTPHYIFEIAKYCSSDQVEIFSSLSSMNRHVAAIGPRFKFDYFSCPPPTQGEKRLREDISIMIKFWTAMFSDKKRLLATEIEPAPELELAVANWKSLSE---KQWKDNVNLAWPLAVQLPARFKNTEAIVTRLVRL-------DPGAVSD------VPEAIKFKVLRSFPPD-AILFYIPQDKMGYV |
6 | 6c72A3 | 0.09 | 0.09 | 3.41 | 0.71 | Neff-PPAS | | IYAKAMAKSNVEVRGTFDSFVSVGSEADINNLRTVVQGTFWHSSDGSQVYLVPENVTGAGVSNLKMLGSRLGSTSSNCGFGIKGDSFTAKWVDTSGFRLEGLYIRGKDGVSCSNHYFENCNFLDARRTAALVYCHDVTFKNCTFQQLKPELTWVYLFDIEPNPATTDTVYNVTLINVFNALASAGAEPTVLVKEQNTPTGSPNVKFLNCRFKG |
7 | 1hmcA | 0.12 | 0.07 | 2.31 | 0.42 | HHsearch | | QSLDSQMETSCQITFEFVDQELDPVCYLKK----AF----LLVQDIMETMRFRDNTPNAIAIVQRLKSCFTKDYEEHDKACVETPLQLLEKVKNVFNETKNLLDKDISKNCNNSFAECSS-----Q--GH----------------------------------------------------------------------------------- |
8 | 4ynsA | 0.11 | 0.06 | 2.20 | 0.70 | SP3 | | ---EATNKEGGTIIMVAGRDGHGGEGF--YHNLADVD-DPKEFLDQAINTPRLPDQWTAQIFARILVHHHSDLVDPDLTNMAKTLDEAMEKAYAREGQAAKVTVIPDGLGV-----IVKASWSHPQFE------------------------------------------------------------------------------------- |
9 | 1w9zA | 0.09 | 0.08 | 2.85 | 0.71 | PROSPECTOR2 | | --------------------ALPSNVKLSKGEVEKIAVTKKEMFDELAQCNLPTIELITRE-----------------HTFNGDVIRFAAWLFLMNGQKLMIANNVAVRMGMQYATNVKITYVTSNNVVKLGHIAANPYSFITYEHNLISNQILFITSLSTTASSTN-SFAYSACSVPIEDWDTSCASLTAMSASSGSLPLTTIPAVTPLIFS |
10 | 1fgjA1 | 0.10 | 0.07 | 2.46 | 0.62 | FFAS03 | | -----------------------------------------------DISTVPDETYDALKLDRGKATPKE---------TYEALVK--RYKDPAHGADYWEPIAISIYMDPNTFYKPPVSPKEVAERKDCVECHSDETPVWVRAWKRSTHANLDKIRNLKSDKETLKEVGCIDCHVDVNKKDKADHTKDIRMPTADTCGTCH---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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