>PF03148 (374 residues) WRKHNENVLNSDIVTESNIVDYNAKTSMMQAFGTIDKQQSENYKRLRQKAKDIFRWKVEV ERACKMITEEVELLEIERQRLKGASKVLMLPESISRQCLDMRSSRSQPDLVADLAEIQLV KEMNLVSEVRETLKTTLNQIEEQLKINKAAKHRIEYDWCDKTMAYNTDTINLSLSTKSNT ILFRPGSTRFGEFSAPLEYWEYFCRENIENCEAVRQKSVDLRSTLNAILVNNGRKLRNQA DKTDAALAETVALTTELCTKLKENLMTTLQKIADMESLIQNLQDAVRKTDAAMKLAQTRL DNRNNWRPHGESVRDQPHLGLIEEVKKIHETVTSLLGQLKNAERVREGLLEKRIQLEKDI ASKNKTLITDRERC |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | WRKHNENVLNSDIVTESNIVDYNAKTSMMQAFGTIDKQQSENYKRLRQKAKDIFRWKVEVERACKMITEEVELLEIERQRLKGASKVLMLPESISRQCLDMRSSRSQPDLVADLAEIQLVKEMNLVSEVRETLKTTLNQIEEQLKINKAAKHRIEYDWCDKTMAYNTDTINLSLSTKSNTILFRPGSTRFGEFSAPLEYWEYFCRENIENCEAVRQKSVDLRSTLNAILVNNGRKLRNQADKTDAALAETVALTTELCTKLKENLMTTLQKIADMESLIQNLQDAVRKTDAAMKLAQTRLDNRNNWRPHGESVRDQPHLGLIEEVKKIHETVTSLLGQLKNAERVREGLLEKRIQLEKDIASKNKTLITDRERC | |||||||||||||||||||
1 | 5j1iA | 0.11 | 0.09 | 3.11 | 1.23 | SPARKS-K | --------------SRCQRCISELKDIRLQLEACETRTVHRLRLPLDEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLA-------------------LSPAA------PTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA----------------QAVPAT----LPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMD--------------SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQL | |||||||||||||
2 | 2tmaA | 0.12 | 0.09 | 3.19 | 2.02 | FFAS-3D | -----------------DAIKKKMQMLKLDKENALDRAEQ-----AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKAT-----------------DAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMK-----------------------------VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERA-EERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLK------------------EAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELD------------- | |||||||||||||
3 | 5j1iA | 0.09 | 0.08 | 3.13 | 1.43 | MUSTER | ---SRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTIS---LVIRGTQGAEEVLRAHEEQLKEALPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-----SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQ----SGSESVIQEYVDLRTHYSELTTLTSQYIKFISET------------------------- | |||||||||||||
4 | 1hciA | 0.10 | 0.09 | 3.30 | 1.23 | CNFpred | -----------GAWQRLEQAEKGYEEWLLNEIRRLE-RLEHLAEKFRQKASTHETWAYGKE-SLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDY----------HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQ----SLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIITGALEDQM-NQLKQYEHNIINYKNNIDKLEGDHQLI-YTMEHIRVGWELLLTTIARTINEVETQILTR | |||||||||||||
5 | 5j1iA | 0.11 | 0.10 | 3.64 | 1.83 | Neff-PPAS | ELKDIRLQLEACETRTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL-SPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPAT-LPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERD-----------VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLR-YYRESADPLGAWLQDARRRQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLESGSESVIQEYVDLRTHYSELTTLTSQYIKFISET------------------------- | |||||||||||||
6 | 1c1gA | 0.12 | 0.09 | 3.14 | 1.38 | PROSPECTOR2 | ---------MDAIKKKMQMLKLDKENALDRADEAEADKK-----AAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRR----------IQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKD------------------------------------EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELS-EGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE------------------FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----------- | |||||||||||||
7 | 5h5mA | 0.06 | 0.05 | 2.24 | 1.17 | SPARKS-K | LINEIDTFQNRIRGTDRPDLEGHCERIVSGSASIADSTRENRKQKIVAECNNLRQALQELLTEYEDIPLGIAEVHKRTKDLRRHLRRAIVDHISDAPLILLIEAAKEGH------EENTRYRSKMFQEHANEIVSVARLSCQLSESVSVIQHTAAQLEKLAPQVAQAAILLCHQ----------------PTSKTAQENMETYKNAWFDKVRLLTTALDNITTL-DDFLAVSEAHIVEDCERGIKGITTVDCAAGSIRGRALRVCDVVDAEMDFLSEYTETVKQAVRILKTQ------------------------RVDQFAERASALANRQEAHGLTWKTKEEEMNEFINACTLVHDAVKDIRHALLMN---- | |||||||||||||
8 | 5lm1A | 0.10 | 0.08 | 2.99 | 1.88 | FFAS-3D | --------------EASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSNLDAYSHIPPQLMEKCAALSDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDE----------LLEQKFQEAVITSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLDQVRAALPTPALS---------------------PEDKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITMKKLFEEQLKKYDQLKVYLEQNLDRVLCALTEANVQYAAVRRVLSDLDQKWNSTLQTLVAS-----------YEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQLLDRE---------- | |||||||||||||
9 | 6ek7A | 0.08 | 0.07 | 2.86 | 1.26 | MUSTER | -------IFTKEDLINLKLYVRKGLSLQDEVEAYLPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINQMPITLRVKTLLGDITDKQLENI--------------SADHEVASALKDILDDMKGDINRHQTTTENVRKKVSDYRITLTGG----ELSSGDKVNGLEPQVKTKYDLMSNMRKSIKELDEKIKEKRQRIEQLKKDYDKFVGLSFTGAIGGIIAMAITGGIFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALSLSFSDIGIRMVDAESALNH--DFM----LSVLNQITESQIQFAMILTSFVNKFQQVITPWQSVGDSARQLVDIFDEAIKEYKKVY--- | |||||||||||||
10 | 5j1iA | 0.10 | 0.08 | 2.89 | 1.21 | CNFpred | ---------CQRCISELKDIRLQLEACETRTVHRLRLLDKEPARECAQRIAEQQKAQAEVEKGVARLSAEAEKVL-AAPTLRSELELTL------------------------GKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKA-----------------------SLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERD-----VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM--------SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLE------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |