>PF03117 (264 residues) QLRGLIAALRRHAGKVPCGNPLYVLARQAVQTFCDTCPRYLVPLRALGLHDETRGGGSTA AAAAVGHAGAGQQAHHVEPTKIVLFALSAALRGGLIGSVIDLPLWCLCRLKCERHLDARS LVAVVCRQCGHCLNLGKEKLHCQQNFPLNSMFYYRDRQEKSVIFNTHAELVHCSLCGSQR VVRQRVYELVSETLFGQRCVRVGWKAVLGLNAACAVYDHRLAFDVILPCAARTCDSTVVV RGVTVPRLLRLTSHGHGLLCARCQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | QLRGLIAALRRHAGKVPCGNPLYVLARQAVQTFCDTCPRYLVPLRALGLHDETRGGGSTAAAAAVGHAGAGQQAHHVEPTKIVLFALSAALRGGLIGSVIDLPLWCLCRLKCERHLDARSLVAVVCRQCGHCLNLGKEKLHCQQNFPLNSMFYYRDRQEKSVIFNTHAELVHCSLCGSQRVVRQRVYELVSETLFGQRCVRVGWKAVLGLNAACAVYDHRLAFDVILPCAARTCDSTVVVRGVTVPRLLRLTSHGHGLLCARCQ | |||||||||||||||||||
1 | 2ftyA | 0.09 | 0.08 | 3.06 | 0.61 | SPARKS-K | ARELLDVQLQAAYNDYGVSSVMFMDIMSAMYATRKNGFTTMLHAENGMIEALEEQGLTDAYYHGVSR-------PSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCP---QYALLSDAITRCGVGIDLSSISESPFTNP-------DDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFT-----IVGSDHCSYNYYEKTSTASKHKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKL | |||||||||||||
2 | 5v3jE | 0.15 | 0.12 | 4.18 | 0.45 | FFAS-3D | TPSQLSHHQKLHVGEKPCGKAFPSNAQLSLHHRVHTDEK---CFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHA----GARRFECQLALHQMSHTGEKPHK---CKECGKGVHTGETPYECGKGFRRGSELARHQRGDKPYK---------CKECGKSFTCTTELFRHQKVHTGDRPHK----------------------------C--KECGKA-FIRRSELTHHERSHSGEKPYECKEC- | |||||||||||||
3 | 4nl4H | 0.14 | 0.11 | 3.61 | 0.47 | HHpred | -----------------------EVYLSVLENVLAQGRQALVMVPEIGLTPQTIANAPHSGGEAGTRDSSYEGWRYGPLQAGLSPALISRMRQHLQA-----------DNQVILFLRRGFAPALLCHDCGWCPRCDS------------YYTLHQAQ---HHLRCHHCDSQQCPSCGSTHLVTEQLEQALAPLFPEVPIS----R--IDRH----LAAHRGGARILIGTQMPDV-TLVSL--LDVDGAAQLYTQVSGR------ | |||||||||||||
4 | 3mruA1 | 0.11 | 0.10 | 3.67 | 0.61 | MUSTER | SPAPLWQFFDKIC-SIPHPSKHEEALAQYIVTWATEQPTGNVFIKKPATPGMENKKGMVPQKNEDTDHDFTQDPIQPYIDGEWVTA-----KGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLTIEAGM---TGAFGLEAGW-LKGDILLNTDSEQEGEVYMGCAWKPDA-----DSEI-MAIFRDMY-EGIYGHKPNIMVIHA--GLECG-LFKEPYPNMDMVSPTIKFSPDEKVKIDTVLFWDQMVALLE--AIPEKA-- | |||||||||||||
5 | 2dr1A | 0.07 | 0.05 | 2.15 | 0.80 | CNFpred | CFPEVLEIMKVQMFSHRYRKVHMDTVERLREFLEVEKGEVLLVPS--------------------------------SGTGIMEASIRNGVSGKVLVTIIGAFGKRYKEVVESN----GRKAVVLEYEPGKAVKPE----------DLDDALRKN--DVEAVTITYN-----ETSTGV----LNPLPELAKVAK----HDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKA-GLAIGAFSERFLEIAEKM------------ | |||||||||||||
6 | 3j20W | 0.22 | 0.05 | 1.56 | 0.35 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------MAKP-IIPMPRSRFLCIDCGNEQIVFSHPATKVRCLICGAT------LVEPTG----G--------KGIVKAKI-LEVLE---------------------------------------------- | |||||||||||||
7 | 4i6jB | 0.10 | 0.09 | 3.52 | 0.70 | Neff-PPAS | HPELIKQIIKRHSNHLQDSSKESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEEEFD---------PFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRELVVCAPLDEELIRIAERCKNIGLGECE | |||||||||||||
8 | 5vbnB1 | 0.29 | 0.04 | 1.27 | 0.33 | HHsearch | ---------------------------------------------------------------------------------------------------------------------SYVLPEVICRSCNFCRDL----------------DLCKDS----------SPQWLCSNCQAPYD----------------------------------------------------------------------------------- | |||||||||||||
9 | 4dy0A | 0.09 | 0.07 | 2.73 | 0.79 | SP3 | TKKQLAMVMRYGVNG------VGKILKKINKAIVSKKNKDIVTVAKNASEIEVPFVTRNKDVFQCEVRNVNFEDPASACDSINAWVKNET--RDMIDNLLS-----------PDLIDGVLTRLVLVN----AVYF-KGLWKSR--FQPENTFVAADGKSYQVPML-----AQ--------LSVFRCGSTSAPNDLWYNFIELPYH------------GESISMLIALP-TESSTPLSAIIPHISTKTIDSWMSIMVP---KRVQ | |||||||||||||
10 | 3iz3A1 | 0.07 | 0.07 | 2.78 | 0.78 | PROSPECTOR2 | SIEQKGDAVALYDTKTSTVRIDDLLSPLLVYRTYIKGDTMTMTQGSAAVDSDITFVGNRMIAPLPEGYIPKPMHRNNSTMKMLSLYVALKKLENFATNSYLMAPDAVNILRRFNRNVSNVRIIGMGDRAVEPNIRVRVPFPIDKNISADFIICDINSYEDQCASAATRALVKINHPSEY------MINSVIERLSQLGGVFYHTALLKTASQ----NPYSYETYIYITPIAAAVRFPFYSNS---AMINRYMTAVAD---DEMP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |