Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MSTTNDNTTMQRLMITDMRPLSMDSIITSLTKEIITHKFIYLINNECIVRKLDERQATFTFLVNYEMKLLHKVGSTKYKKYTEYNTKYGTFPMPIFINHGGFLECIGIKPTKHTPIIYKYDLNP |
1 | 2zs6B2 | 0.14 | 0.13 | 4.41 | 0.84 | SPARKS-K | | -GVINPSENIEEIPIPDDYTYNIPTSIQNNA-----CYVLFKVNTTGVYKITTKNNLPP--LIIYEANLSND-NIKAIKYITGLNRSDAKSYLIVSLFKDKYIRIPQISSSTTSQLIFKRELGN |
2 | 3iz3A1 | 0.14 | 0.14 | 4.67 | 0.36 | FFAS-3D | | VPFPIDKNISADFIICDI-NSYEDQSFESMFSETISVVTTCASAATRALVKIN---HPSEYMINSVIERLSQLGGVFYHTALLKTASQNPYSYETYIYITPIAAAVRFPFYSNSAMINRYDEMP |
3 | 1wao1 | 0.18 | 0.14 | 4.45 | 0.38 | HHpred | | ----LPSETNPYIFNVDRGSFSVEVILTLFGFKLLYPDHFHLLNHETD--NMNQI-------YGFEGEVKAKYTAQM---YELFSEVFEWLPLAVLIMHGGLF-----SEDGVT---------- |
4 | 2iy0A | 0.20 | 0.18 | 5.68 | 0.66 | MUSTER | | FRNGNQDEVAFRLTITDIQTLN-HLN---LNDEIINFYMNMLMERS------EKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKVDFSVDILLVPIHLGVHWCLAVVDFR----KKNITYYDMGG |
5 | 1sxjF | 0.12 | 0.09 | 3.16 | 0.57 | CNFpred | | ---------MLEAKFEE---ASLFKRIIDGFKDCVQLVNFQCKEDGIIAQAVDD-SRVLLVSLEIGV-----------EAFQEYRC----HPVTLGMDLTSLSKILRCGNN-TDTLTLIADNTP |
6 | 1vt4I | 0.21 | 0.21 | 6.66 | 0.86 | HHsearch-2 | | QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYNCLLVLLNVQKILLTTRFKQVTDMTLTPDEVKSLREVLTTNPRRLSIIAESIRGLATWTIIEVKMFDRLSVFPPSAHIPTILKYSLIP |
7 | 6c5dA | 0.13 | 0.11 | 3.94 | 0.66 | Neff-PPAS | | -----------KVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDSGILSNYATDPRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEIILLADTRYNVLN-GLIN- |
8 | 5u89B | 0.24 | 0.05 | 1.51 | 0.42 | HHsearch | | IAIPFAENTRSNAHWIDMRPNSLKD--------------------------------------------------------------------------------------------------- |
9 | 6c5dA | 0.12 | 0.10 | 3.73 | 0.60 | SP3 | | -----------KVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDSGILNDKVSILRLGGGIKRIISAEVDKIKENRLDYELKIDDILLFTYISYKKYTLEI-ILLADTRYNVLNGLIN- |
10 | 4aq1A3 | 0.06 | 0.06 | 2.41 | 0.44 | PROSPECTOR2 | | EVPVQVQNQGFTLVDN--------------LSNAPQNTVAFNKAEKVTSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIINGSELLVTANAGQSGKAVTFKDNTKRTFTVDVKKEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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