Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MNQILLCSPILLLLFTVASCDSEQQLDSAMHLKSDSTKSASLKNVAPKNDETQAKIAKDDVALKDAKKGDYIMDIDISDLPLDDYPINRSKSLKSSSIDLNNIPFNKGLDDFPAKEKNQGSNQSALKALQQRLLTEQNNSLLLRNHSIYLMKEIEARKTDIIKVRQLNLDLELELNTVNRRLLELNGQLQNTRKSTKPCKKRSSKDSAPPAANQFQEANVRNTYRNKYLTLLKELSQKINNEIAKVATDVPTETNPSQGNLPTL |
1 | 5yfpE | 0.10 | 0.10 | 3.75 | 0.80 | SPARKS-K | | KQNYIQSVELIRRYNDFYSMGKSDIRLSKLILSSKLETSS-IPKTINTKLVIEKYSEMMENELLENFNSAYR-ENNFTKLNIILNNFNGGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHQNLINDVETVIKNESKIVKRATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEIDDSNQILSTTLEQCFADLFSGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKL |
2 | 3u0cA | 0.09 | 0.04 | 1.60 | 0.91 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------GEKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPESPE--KKKLSREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSM---------------- |
3 | 6f1tX2 | 0.14 | 0.05 | 1.54 | 0.45 | HHpred | | ---------------------------------------------------------------------------------------------------------------------RLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGG---------------------------------------------------------------- |
4 | 5nnvA | 0.12 | 0.10 | 3.59 | 0.98 | MUSTER | | --------------------------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAKEQACKGEEDNLARLKKELTETELALKEAKEDLSFTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEQKTTL |
5 | 2j68A | 0.13 | 0.05 | 1.84 | 0.61 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------PKFMDSLNTFLTRERAIAEQVRTLARLACNHTREAVARRIPLLEQVNELKKRIDSVEPEFNKLTGIRDEFQKEI----------------INTRDTQAR-TISESFRSYVLNLGNTFENDFLRYQP---------------- |
6 | 2pffB | 0.15 | 0.14 | 4.82 | 0.90 | HHsearch-2 | | TRPLTLSDQVLNLCLEFENCYLEGQENDTLVKTKMAKRPFKKSNSALFRAVGEGNAQLVA-IFGGQGNTDDYFEELRDLYQTYHVLVGDLETLSAVFTQGLNILEW--LENPTPDKDYLLSIPISCPLIQLAHYVVTAKLLGFTPLRSYLKGASQGLVTAVAIAET--DSWESFFVSVRKAIT----VLF---FIGVRCYEAYPNTSLPPLENNLQQVQDYVNKTNSHLGLNLTLRK------AKALDQIPFSEKFSNRFLPVA |
7 | 5nnvA | 0.11 | 0.09 | 3.39 | 1.16 | Neff-PPAS | | ---------------------------------------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEQKTTL |
8 | 6f1tX2 | 0.15 | 0.06 | 1.92 | 0.65 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSY-----------------R-------------------QLQGGGGG----GGGGGGGGGGGGGGGGGG- |
9 | 4bjmA | 0.07 | 0.06 | 2.48 | 0.62 | SP3 | | ------------------QPEFDRGFLRPFGAKMKFLKPDQVQKLST--DDLITYMAEKDKNVRDLAIKLRDA---KQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESLTRDALLELTEEQYVEKAAKDVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNAKIERLALTLLYLAIAADFLKNQAN----------LHADDPELNLYKAETKAREIKANRAMKEALEGADKLFERNKILKSPDM--------- |
10 | 3tnfB | 0.09 | 0.09 | 3.31 | 0.96 | PROSPECTOR2 | | LDGKDLEDKYKTYEENLEGFEKLLTDSEELSSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEATKLLHKHNGLNLKLANLQDMLAVHRKEQYETPMTVKKLVHHNKGLETTIHKERVEETKQQLEDNGKEKIEIANNISK------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|