Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LARLSGAAAPERHPRVQLKREAMEAYVPRQNAFRERPGEEGEEMRDLRFRAGREMQLDRERVLQPEDFEGRVEEAGGVSAARAHMSAASLAQAYEQTVREEVNFQKTFNNNVRTLVSRDEVTMGLMHLWDFVEAFLQHPRSRALTAQLLLIAQHCRDEGMVKEALLSLGAPESRWLVDLVNLLQTIVVQERSMSLSEKVAAIN |
1 | 5cwpA | 0.19 | 0.17 | 5.39 | 0.74 | SPARKS-K | | ------MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRD----------------PSSSDVNEALKLIVEAIEAAVRALEAAERTGDP-----EVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPVRELARELVRLAVEAAEEVRNPSSEEVNEALK |
2 | 5jxdA | 0.13 | 0.11 | 3.78 | 0.83 | FFAS-3D | | ------TDVFNSKNLAVQAQKKILGKMVSKSIATTLIDDTSSEVLDELYR-----------VTKEYTQNKKEAERVIKNLIKTVIKLAVLHRNNQDELALMEKFKKKVHQLAMTVVSRNVLSRLLNECRELLHEIIQRHLTAKSHGRVNNVFDHFSDSDFL-AALYNPFGKFKPHLQKLCDGINKMLDEEN------------ |
3 | 6et8A | 0.14 | 0.05 | 1.85 | 0.32 | HHpred | | ----------------------------------------------------------------------------------------------------------------------RNQTWL--ELVGEAQQLGERPADEPLTRWE-QLEQDTAGRPEFLTRLNEHATPEIDFITRAFAESKLAIWA-RYLNAEELA-FT- |
4 | 5cwmA | 0.17 | 0.16 | 5.19 | 0.64 | MUSTER | | ------------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAARE-AKKVLEQAEKEGDPEVALVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAERAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARAKRVLELAEKQGDPEVELVKRVAELLERIARESGSEEAKERAERVR |
5 | 4uqiA | 0.08 | 0.05 | 1.91 | 0.61 | CNFpred | | ------------------------------------------------------------------------------------NAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAYTWYVDTILNLIRIAGDYV-SEEVWYRVIQIVINRDVQGYAAKTVFEALACHENLVKVGGYILGEFGNGDPRSSPLIQFNLLH |
6 | 1vt4I3 | 0.12 | 0.07 | 2.63 | 1.07 | HHsearch-2 | | -----------------------------------------EYALHRSIVDHYNIP----KTFDSDDLI--P---PYLQYFYSHI-GHHL----KNIEHPERMT----------LFRM------VFLDFRFLEQKIRHDSTSTLQQLKFYKPYICDNDPKYERLVNAILDLICSKYTDLLRIALM---AEDEAIFEEAHKQVQ |
7 | 5cwmA | 0.16 | 0.15 | 4.93 | 0.71 | Neff-PPAS | | -------------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESSEEALERALRVAEEAARLAKRLRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVELVKRVAELLERIARESGSEEAKERAERVR |
8 | 1vt4I3 | 0.13 | 0.08 | 2.72 | 0.88 | HHsearch | | -----------------------------------------------EYALHR--SIVDHY-NIPKTFD--SDDIPP-------------------------YLDQYFYSHIGHHLEHPERMTLRMVFLDFLEQKIRHDST-AWNASGSILNTL----QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSTDLLED- |
9 | 3pjrA | 0.08 | 0.08 | 3.12 | 0.59 | SP3 | | YYEAMNEADEAQFVAGRIREAVERGERRYRDLYRTNA--QSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILANPDDDLSLLRIINVPKRGIGASTIDKLVRYAADHELSLFEALGEAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLA |
10 | 4bjmA | 0.10 | 0.09 | 3.47 | 0.82 | PROSPECTOR2 | | QPEFDRGFLRPFGAKKNVRDLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAELVSEESLTRDALLELTE--------EQYVEKADVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNAKIERLALTLLDYLAIAADFLQANLHADDPELNLYKAET----KAREIKANRAMKEALEGADKLFERNKISPDM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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