Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DGKLRHPVDYVTWDHMNAKYPTFADEARNLRLGLSTDGFNPFNMKNSMYSCWPVLLVNYNLPPDLCMKKENIMLSLLIPAPHQPGNSIDVYLEPLIDDLNTLWSIGEVTYDALTRSAFTLKAMLLWTISDFPAYGNLAGCKVKGKMGCPLCGKNTESMWLKFSRKHVYMGHRKGLPPTHSFRGKKKWFDGKVEQGRRGRILTGRDISQNLR |
1 | 4wwxB | 0.15 | 0.13 | 4.48 | 1.03 | SPARKS-K | | VSALMDM-EEDILEGMRSQLDDYLNGPFTVVVKESCDGMDVSEKVPEKAVRFSFTVMRITIEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKS-SELTLEMG-GIPRTFKFIFRGTGYDEKLVREVEGLEASGVYICTLCD-----------------TTRLNLVF-HSIRSHAENLQRYEVWRSNPYHESVEELRDRVK |
2 | 6cikA | 0.14 | 0.09 | 3.09 | 1.11 | CNFpred | | ---------VSALMDMEEDILEGMR-PFTVVVKESCDGMGDVS---EKAVRFSFTVMRITIEVKVFEE-LCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEMG--GIPRTFKFIFRGTGYDEKLVREVEGLEAGSVYICTLCDTTR-------------------------------------------------------- |
3 | 6b40A | 0.08 | 0.08 | 3.13 | 1.14 | HHsearch-2 | | PDFCPNTYAHAVAKTLEDEINGLKTLVIHTICKDGADGMGDHKEKSDPDKALRFSFCVLRCSVMHPNSVRSNRPVLECIGDENDDGTVAVCVGPIECQRLLMKDKIMRV--HMSDGQRAHYLTFFNSMVDEKWDRAHGGLAGASKYLCTLCEAVRDEAL----EKAGSYKI---TRTLESQEKDTFGVKGYPLLTTEPWERGIVDAESKLD |
4 | 6b40A | 0.09 | 0.09 | 3.26 | 1.60 | HHsearch | | PDPCPNTYAHKTLEELEDELKKLPTLVIHTICKDGADGMGDHKEKSDPDKALRFSFCVLRCSVMHPNSVRSNRPVLECIGDENDDGTVAVCVGPIECQRLLMKDKIMRV--HMSDGQRAHYLTFFNSMVDEKWDRAHGGLAGASKYLCTLCEAVRDEAL----EKAGSYK---ITRTLESQEKDTFGVKGYPLLTTEPWERGIVDAESKL- |
5 | 6b40A | 0.08 | 0.07 | 2.86 | 0.80 | SPARKS-K | | GVRFPAHAVAKTLEELEDEIVNGLTLVIHTICKDGADG--MGDVSVHKEKALRFSFCVLRCSVMHPNSVRSNRPVLECIGDENDDGTVAVCVGPIECQRLLMKD-KIMRVHMSDGTQRAHYLTFFNSMVDEKWDRAHGGLAGGSKYLCTLC----EAVRDEALE-----KAGSYKITRTKKIEVTASKMKYESQEKDTFGVKGYNMGNYFK |
6 | 4wwxB | 0.13 | 0.11 | 3.98 | 0.57 | FFAS-3D | | ---LMDM-EEDILEGMRSQLDDYLNGPFTVVVKESCDGMGDVSEK-VPEKAVRFSFTVMRITIEHGSQNVKVFPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLE--MGGIPRTFKFIFRGTGYDEKLVREVEGLEASGSVYCTLCDTTRLE-------------ASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVK |
7 | 4wwxB | 0.15 | 0.13 | 4.31 | 0.53 | HHpred | | --------EEDILEGMRSQLDDYLNGPFTVVVKESCDGMGDVSEKVVRFSFTVMRITIEH---G----SQNVKPLCLMLADESDHETLTAILSPLIAEREAMKSS-ELTL-EMGGIPRTFKFIFRGTGYDEKLVREVEGLEASSVYICTLCDTTRLEAS----QNLVF--H-------SITRSHAENLQRYEVWRSNPYHESVEELRDRVK |
8 | 1vw1A | 0.12 | 0.11 | 4.02 | 0.72 | MUSTER | | DMASKDMTPEQSNVYRDNSYQQFTNNVRRVNNRYAEDYEIPSSVSSRKDYGWGSMVYNGDIPYKAASSDLKIYISPKLRIIHNGYEG---QKRNQCNLMNKYGKLGDKFIVY---TSLGVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLFHRDTVEAWIPGAKRSLTNIGDDYATDSL---NKPDDLKQYIFM--TDSKGTATDVSGPVE |
9 | 5zdzA | 0.14 | 0.09 | 3.23 | 1.07 | CNFpred | | ---------VSALMDMEEDILEGMR-PFTVVVKESCDGMGDVSEKH-KAVRFSFTVMRITIEVKVFEE-LCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEMG--GIPRTFKFIFRGTGYDEKLVREVEGLEAGSVYICTLCDTTR-------------------------------------------------------- |
10 | 4wwxB | 0.13 | 0.12 | 4.26 | 0.93 | HHsearch-2 | | VDTIAKRYDSSALMDMEEDLDDYLNGPFTVVVKESCDGMGDVSEKPVRFSFTVMRITIEHGSQNKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKS-SELTL-EMGGIPRTFKFIFRGTGYDEKLVREVEGLEASSVYICTLCDTTRLEAS----QNLVFH---------SITRSHAENLQRYEVWRSNPYHESVEELRDRVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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