Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LNFQPKAFFALGSPIGMFLTVRGLEGLGEDFKFPTCPKFFNIFHPNDPVAYRMEALVSPKMIGVPAVVIPHHKGRKRMHLELKDTMAHVTAALKQKLVDSMRSTWNTVYQLAMFHRPDSTIQQEVDKVIEDEILSNNECEPTASNQYLLTEQEALEMKVGKLNDGDRIDYVLQEAPLETFNQYISAVRSHVVYWESEDTMLLILKELY |
1 | 4ewcA | 0.13 | 0.12 | 4.20 | 0.70 | SPARKS-K | | VTANGKVKQVEVNLNDLKAAFRQSRPKRSDYRKATESSISNQCALIK-SVLSADQLFAPGVKRAEGANIPYLRHRNCGGVALKRIKNKIFSIIQKKVRGRCRTEEQRLLTSALKISDGENKFQRIDTLCTSFLIDPPRTQEGNSVLADFKNGEDACKICRELK-------VGVNSTFTSVARTCVAVSVATAFC-SADIIENAVPGSE |
2 | 5zwnY | 0.10 | 0.08 | 3.03 | 0.60 | FFAS-3D | | MGPKICKSYLVGCPYDLF--------QGTKQSLGKCPQM----H---------LTKHKIQYEREV----KQGKTFPEFEREYLAILSRFVNECNGQISVALQNLKHTAEERMKI------QQVTEELDVLDVRIGLMKLQELISKRKEVAKRVRNITENVGQSAQQKLQYLSRLDTDRRLADHF-LGKIHLGYVKMRED----YDRL- |
3 | 1bs9A | 0.09 | 0.07 | 2.74 | 0.31 | HHpred | | ----------------HVFGARETTASP-GYG------------SSSTVVNGVLSAYPGS--TA--EAINYPACGASYSSSVAQGIAAVASAVNSFNSQSTKIVLVGYSQGGECGGNAVQLSNMVKAAFDPM---FRAGLSGTCAAGGFQRPA----GFSCPSAAKIKSYCDASDPYCCNG---SNAATHQGYGSESQALAFVKSKLG |
4 | 4uosA | 0.11 | 0.09 | 3.33 | 0.67 | MUSTER | | -----------GDNEEVKKMLEKMIEEIKKMLEKAIKK----------VKEMLEKMI-KEIKKM----LENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAMAEKILKMVIELAEKIL--KAKEMAEKILKKVK |
5 | 1h1lA | 0.07 | 0.05 | 2.00 | 0.72 | CNFpred | | MGLRVVAQWSGDGTLVEMENTP--------------FVKLNLVH-CYRSMNYIARHMEEKH-QIPWMEYNFF-----GPTKIAESLRKIADQFDDTIRANAEAVIARYEGQMAAI----------------------------------------IAKYRPRLEGRKVLLYMGGLRPRHVIGAYEDLG-AGYEFAHNDDYDRTLPDLK |
6 | 1vt4I3 | 0.12 | 0.08 | 2.74 | 0.77 | HHsearch-2 | | --------------------------------------EYALHRSIV-DHYNIPKTFDSDD-LIPPYLDQYFYSHIGHHLKNIEHPERMTLDFRFL-EQKIRHDSTAWNA------SGSILN-TL-QQLKFYKPYICDND---------PKYERLNAILDFLPKI-------EENLIC--SKYTDLLR---IALMAEDEAIFEHKQVQ |
7 | 2yfaA | 0.08 | 0.08 | 3.18 | 0.78 | Neff-PPAS | | -----SHMGDIGQLNKDLTDLRIARLQYMIANGDDAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQG |
8 | 2kn8A | 0.17 | 0.05 | 1.58 | 0.38 | HHsearch | | ---DQN---HIEQ--PFYLMGRDKALAVEQFGIKASQEVYTIKLSHDPIEYLLEQIQNLHRVTLAE-------G-------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5cwlA1 | 0.13 | 0.05 | 1.84 | 0.65 | SP3 | | -------------------------------------------------------------------------TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARRGNTDAVREALEVALEIARESG------------------------------------------------- |
10 | 1ihua1 | 0.13 | 0.12 | 4.18 | 0.82 | PROSPECTOR2 | | MQFIPPYLFFTGKGTAIRLAEQSQTIGNTIQAIASVPGLSALEIDPQAAAQQYRARIVDPIKGVLP-------------DDVVSSINEQLSGACTTEIAAFDEFTGLLTDASLLTRFDAPTGHTIRLLQLPGAWSSFIASCLGPMAGLEKQREQYAYAVEALSDPKRTRLVLQKSTLQEVARTHLELAAITEAANDTLAAAIWLSRLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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