Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LLLVDKLGTQIEATIGPRFSAFYYDRIKENQWKTITTFIVRPNCEAIRTTPHEFRILFMEQTVVTPSTTKETVVLNNFTPFDYIIEDTVRKYTL |
1 | 4gopC | 0.19 | 0.19 | 6.16 | 2.13 | SPARKS-K | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELESVEANQQCD |
2 | 1fguA1 | 0.14 | 0.11 | 3.66 | 1.46 | FFAS-3D | | SLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLP-------------------- |
3 | 4gopC | 0.20 | 0.19 | 6.14 | 1.74 | HHpred | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELESVEAN--QQ |
4 | 4gopC | 0.21 | 0.20 | 6.43 | 2.13 | MUSTER | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELES--VEANQQ |
5 | 4gnxC | 0.18 | 0.18 | 5.87 | 1.95 | CNFpred | | VNLLDDS-GEIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELESVEANQQCD |
6 | 4gopC | 0.20 | 0.19 | 6.14 | 2.00 | HHsearch-2 | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELESV--EANQQ |
7 | 4gopC1 | 0.23 | 0.18 | 5.66 | 2.13 | Neff-PPAS | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATDVP-------------------- |
8 | 1fguA | 0.20 | 0.19 | 6.15 | 2.94 | HHsearch | | LELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDHLPTVQFDFTGIDDLENKSKDSLV- |
9 | 1fgua | 0.19 | 0.19 | 6.16 | 0.78 | PROSPECTOR2 | | LELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDHLPTVQFDFTGIDDLENKSKDDGVS |
10 | 4gopC | 0.21 | 0.19 | 6.07 | 1.11 | SAM | | VNLLDDSG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDDVPEVKYEFVRINELES-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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