Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | EQMDQLLNPLGEKLEAFKKKVEETYDDENRQRATLKEQIKQMAELNKTMSEDAKNLTKALKGDSKTQGNWGEVILQRILEKSGLRKDEEYFVEQSVTMDDGRRIRPDVVVRLPDEKFLVIDSKVSLTAYEQFSSAEDEADQERALKEHINSIRTHVKGLSEKNYQHIHGDRSPDFVLLFIPIEPAFGAALQHDSNLYYEAFDKNIVIVSPSTLLATLATIDSVWKQEYQNKNAMEIAKRGGALYDKFVLFVESMNDIGQRIRQTQDSYDEAMGRLSTGAGNLVRQAEMIRKLGAKTSK |
1 | 5xg2A | 0.10 | 0.07 | 2.63 | 1.22 | FFAS-3D | | -RWGKRKEKLIEEIRAREEERNAL----VVRLGEIDRTFAVAREEFDTVVKELEEARKSL-----YEGEARIKRAEEKERLKAEILTGE------------------------------------ARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQ-------------------SFELRIKLSDLEKELELARKD-------LEKVLAEERAVRE--EIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKAIRAVEKEIAALREELSRVEGKLEGL------ |
2 | 5cwqA | 0.14 | 0.10 | 3.56 | 1.07 | PROSPECTOR2 | | EELERESEEAERRLQEARKRSEEARER-----GDLKELAEALIEEARAVQELARVACER---GNSEEAERASEKAQRVLEEA-------------------------------------------RKVSEEAREQGDDEVLALALIAIALAVLALAEVACCR------------------GNSEEAERASEKAQRVLEEARKDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD--SEVKRLAEEAEQLARE----ARRHVQECRGGWLEHHH |
3 | 5j65A | 0.13 | 0.10 | 3.61 | 0.87 | SPARKS-K | | PSIDGYFKKLQDELDNIVDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDQKK-----LEGVINIQKRLKEVQLNQAHG----------------------------------------------ESSPAHKELLEKVKNLKTTLERTIKAQDLEKKVEYSFLLGPLLGFVVYEILENIKNQIDEIKKQLDSA-------RDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWATIGAQIENLRTSLQEVQDSADEIQIELEDASDVVAQEARDFTLNAYSTSN |
4 | 6ewyA | 0.09 | 0.06 | 2.18 | 1.21 | FFAS-3D | | AALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTF-AAATYMNGPSVS---------------------------------------------YLSASSPDETVTAAKTLSASSQAVMANLQR--------------------------------------------------------ARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSS------ |
5 | 5lm1A | 0.11 | 0.09 | 3.26 | 0.31 | HHpred | | -VLSGVFTDVEASLKDIRDLLEE----DELLEQKFQEAVGISKAELAEVRREWAKHEKASFTNSELHRAMNLHV--GNLRLLSGPLD-QVRA------------------ALPTPALSPEDKA-VLQNLKRILAKVQEDQRVSLEQQLRELIQ--KDDITAS-LVTTD--HS--------EMKKLFEEQLKKYDQLKVYLEQN------LAAQDRVLCALTEANVQYAAVRRVSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVA----ALLERTQSTCQA------ |
6 | 1sjjA | 0.11 | 0.10 | 3.65 | 0.79 | MUSTER | | EAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWME-GAMEDLQDTFIVH-------TIEEIQGL-------TTAHEQFKATPDADKERQAILGIHNEVSKIVQTY-HVNMAGTNPYTTITPQEI---WEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEITLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEAMEHIRVGWEQLLTTIARTINEVENQILTRDA |
7 | 5gheA | 0.14 | 0.12 | 4.01 | 0.84 | CNFpred | | IKKDGYFKKLQDELDNIVDN-NSDDDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHG--LEGVINIQKRLKEV-------------------------------------------QTALNQAHGEPAHKELLEKVKNLKTTLERTIKAEQDLKVEYSFLGPLLGFVVYEILENTAVQHIKNQIDEIKKQLDSAQHDLDRDVKIIGMLNSINTDIDN--LYSQGQEAIKVFQKLQGIWATIGAQIENLRTTSLQEVDDADEIQIELEDASDAWLVVAQEARDFTLNAYS |
8 | 2gb7B | 0.15 | 0.11 | 3.73 | 0.47 | HHsearch-2 | | KNSDYFLNNPSEYIIAMRKNCWKEFEPFEKEFTMLSYLYDAIRDFTMEYPTHIYDLALNTQSRRSRAGKEFESILELLMMGAGI----PVDVQGAIQ--IG--KLVDLVMPGNKRNTMLISAKTTLERWQEVPE--------------------EVNRTREM-YL-----ATLDNVVVVTT-VENKNF----------K-YKNNNRVLTFEDMLQSAMELSRKWNNVSYDSEKEEIQQSILKQIEKYS-----------DFPYVVNYYRNRLSALF--------------D------- |
9 | 5cwqA | 0.12 | 0.09 | 3.22 | 0.85 | Neff-PPAS | | EELERESEEAERRLQEARKRSEEARERG-----DLKELAEALIEEARAVQELARVACERNSEEAERASEKAQRVLEEARKVSEEAREQG-----------------------------------------------DDEVLALALIAIALAVLALAEVACCRG--------NSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQG------DSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH |
10 | 3s1sA1 | 0.12 | 0.06 | 2.26 | 0.67 | HHsearch | | ----------------------------------------LNNCVFSYGDDEVS-----------VYHPICEAALNQALVNTGLDS--TYEVVHHELVG---SIEADFVIKNKQKKLLIVEVKRTKSQVS------S--------TRYRLQAQSYVREANQHYYCL----TNLEIIDFFKHDP--------NKPVVSQQIIEPSPIVVGNFSDTV--------------SEFYNRLVEAFQNIIDISVN--DA--------------G------------TYK--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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