Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | HPEYGSDSSDQDFELNNVGKFCPLPWKPDVARLCADTNKLFRCFIRCRLNSGPFHDALRRALFDIHMIGRMGYRLKQAEWETIMNLTPRQSLHLRRTLRDADSRSAHPISDIYASDSIFHPIAASSGTI |
1 | 5cwoA1 | 0.07 | 0.05 | 2.27 | 0.65 | SPARKS-K | | -----------------------PELEEWIRRAKEVAKEVEKVAQRAEPDLRDSAKELRRAVEEAIEEAKKQG--NPELVEWVARAAKVAAEVIKVAIQAEKEGNRDLFRAALELVRAVIEAIEEAVKQ |
2 | 2qijD | 0.23 | 0.20 | 6.33 | 0.71 | FFAS-3D | | -----TDSLEFHYKEFGATSFLPSDFFPSVRDLLDTAAALYRDALESPEHCSPHHTALRQAIVVSYVNTNVGLKFRQLLWFHISCLTFGRETVLEYLVSGVWIRTPPA----YRPPNA--PILST---- |
3 | 2qijD | 0.22 | 0.16 | 5.12 | 0.31 | HHpred | | --SLEFHIDPVELLS-----FLPSDFFPSVRDLLDTAAALYRDALESPEHCSPHHTALRQAIL---------------CWGDLMTLADPASRDLRQLLLGVWIRTPPAY---RPPNAPI---------- |
4 | 1jvrA | 0.09 | 0.08 | 2.99 | 0.69 | MUSTER | | --HMGQIHG------LSPTPIPKAPRGLSTHHWLNFLQAAYRL---QPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLI--PKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPP |
5 | 2f9qA | 0.12 | 0.07 | 2.46 | 0.52 | CNFpred | | -----------------------------EQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEDPRFLRLLDLAQEGLKEESGFLREVLN-------------------------- |
6 | 5c17A | 0.10 | 0.07 | 2.58 | 0.40 | HHsearch-2 | | ---------------------------------KTELKKFYELLLA-KL--PKESVPILRTIFFSIR---DGQAVTESSLINQTGINTKTVQSVVKILAQRQMIVREDQKIVLGSIPTTNQIHLGGRTL |
7 | 5cwoA1 | 0.09 | 0.07 | 2.69 | 0.64 | Neff-PPAS | | -----------------------EEWIRRAKEVAKEVEKVAQRAEEEGPDLRDSAKELRRAVEEAIEEAKKQGN--PELVEWVARAAKVAAEVIKVAIQAEKEGNRRAALELVRAVIEAIEEAVKQGNP |
8 | 6ecsA | 0.26 | 0.19 | 5.99 | 0.52 | HHsearch | | YKEFGSSY---QLLN-----FLPLDFFPDLNALVDTATALYEEELTGREHCSPHHTAIRQALV---------------CWDELTKLIAWQVRTIRQTVQEVWIRTPAPA---RPPNAPI----LSTLP- |
9 | 4luqA1 | 0.08 | 0.07 | 2.80 | 0.60 | SP3 | | ------HMTATSDLIESLISYSWDDWQVT----RQEARRVIAAIRNDN-VPDATIAALDKSSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADL |
10 | 1jvr | 0.09 | 0.08 | 2.99 | 0.58 | PROSPECTOR2 | | HMGQIHG--------LSPTPIPKAPRGLSTHHWLNFLQAAYR---LQPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASL--IPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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