Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MLESDVSENTSYSLWIVGAADLCRAALEYIPLPKRLLAVKVAGTWSGMPWALPDTIPTLLTSTWEPTFETAEDKEHFRDNGMTCVYKIIGSPPDPPKPPRTEPSRASSRSDKVFCCW |
1 | 1qzfA1 | 0.12 | 0.11 | 3.89 | 0.74 | SPARKS-K | | SIENLMNDDSIENIFVCGGESIYRDALKD-NFVDRIYLTRVALEIEFDTYEIPETFLPVYMSQTF------------CTKNISYDFMIFEKQEKKTLQNCDPARGQLKSIDDTVDLL |
2 | 3vcoA | 0.16 | 0.12 | 3.97 | 0.62 | FFAS-3D | | -LYNEEFSSIVDEVFIIGGYRLYKEALKQSIYPVRIYCTHILSEVDCDTY-----FPKVDWDKLKKVDLPDIPADTFTENGFTFKFCVYDVP------------------------- |
3 | 3tq8A | 0.09 | 0.06 | 2.32 | 0.28 | HHpred | | ---------KEPEVIIIGGARIFKEALP---KADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHER---D---NPYPFQFLELRRLENLYFQGHHHH----------------- |
4 | 6norA1 | 0.11 | 0.11 | 3.99 | 0.64 | MUSTER | | LVPRGSHMVERLGVAVVGGGFMGGVHAEVLTADPRVDLRWVVDRDERVGTDLATRFGARVTTTLDEALAPAATHEPIAAQVIAAGRNVLVEKPLVLSTGHARQ-AAAHERGVVLAHG |
5 | 1dlsA | 0.11 | 0.09 | 3.05 | 0.73 | CNFpred | | LTEQPELANKVDMVWIVGGSSVYKEAMNHP-GHLKLFVTRIMQDFESDTFFPE-----IDLEKYKLLPEYGVLSDVQEEKGIKYKFEVYEKND------------------------ |
6 | 4c8hA3 | 0.23 | 0.09 | 2.95 | 0.50 | HHsearch-2 | | ILDSNEIGGTDIHVWPLALAY----------DTLNCILVKGKHIWPEFPLPLPSEEIR----------------------------------------------------------- |
7 | 4ylfB2 | 0.11 | 0.11 | 4.00 | 0.70 | Neff-PPAS | | FPEYDTPIRVGKKVAVIGAMDAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNVEAMECVRMELKEADGSGRPRPVPIEGSNFVLEVDMVIE |
8 | 3tq8A | 0.09 | 0.07 | 2.62 | 0.41 | HHsearch | | SLDDAALT-KEPEVIIIGGARIFKEALP---KADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHER---D---NPYPFQFLELRRLENLYFQGHHHHH---------------- |
9 | 1qzfA1 | 0.09 | 0.09 | 3.53 | 0.75 | SP3 | | SIENLMNDDSIENIFVCGGESIYRDALKD-NFVDRIYLTRVLEDIEFDTYEIPETFLPVYMSQTEKQEKKTLQNCDPARGQLKSIDDTVDLLGEIFGIRKMGNRHKFPKEEIYNTPS |
10 | 2ayxA1 | 0.08 | 0.08 | 3.02 | 0.51 | PROSPECTOR2 | | MGGSGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEEVVSKKWQGRAVVTFCRRHIGIPLEKAPG-------EWVHSVAAPHLIEMESDDPANALPSTDKAVSD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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