Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | CQKGLNRGSRRLRKRPKYTLIQSSGSLRDSMMQINESSLLSKVGTIWLHQLVTRNLQSPDWKALSEPSKQLSMDLIRVLPSWVVEWDSLRQDLQDYAMTTAVSLREWVHRNATLDH |
1 | 5cwqA2 | 0.14 | 0.12 | 4.15 | 0.64 | SPARKS-K | | -----SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVCRG--------NKEEAERAYEDARRVEEEARKVKESAEEQAEEAEQLAREARRHVQWLEH |
2 | 5cwqA2 | 0.16 | 0.16 | 5.15 | 0.60 | FFAS-3D | | -----SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQRGGWLEH |
3 | 4yioA | 0.17 | 0.14 | 4.53 | 0.26 | HHpred | | --ANANAALE---KHPEI-----GEDLEALLADVERQALINNGGGHLNHALFWELLSPEK----QEPTAEVAAAINEAF----GSFEAFQEVFTTSATTRFGSGWAWLVVN----- |
4 | 5cwpA1 | 0.15 | 0.15 | 4.92 | 0.72 | MUSTER | | MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNP---- |
5 | 5w81A | 0.17 | 0.11 | 3.69 | 0.49 | CNFpred | | ---------------------------AQKVLLTNKRLALTSEIMENLHSVKAYG-----WEEIME-------TLIKNIRQDEVKLTRKIGSLRYFYSSAYFFSAIFVIVAAVVPH |
6 | 1vt4I | 0.20 | 0.20 | 6.34 | 0.55 | HHsearch-2 | | YQDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSRLFWTLLSKVCLSYKVQCKMDF--KIFWLNLNSPETVLEMLQYQIDPSIQAELRRLLKAWNAFNLSCFKQVTDFLSAATTLDH |
7 | 5cwpA1 | 0.15 | 0.15 | 4.91 | 0.78 | Neff-PPAS | | -SSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNP---- |
8 | 2gqbA | 0.26 | 0.12 | 3.72 | 0.60 | HHsearch | | LDIDSSLS---ARK----ELAKELGYSGD----MNDSASM----NIWLHKQVMSKLVANGGKL--------PPEIKH--------------------------------------- |
9 | 1my6A | 0.14 | 0.11 | 3.85 | 0.64 | SP3 | | LTQDTE-----LADKSLEDVIRTTYGDA------AKVGIFNNAAQVWNHTFFWNSL-KPG--GGGVPTGDVAARINSAFGS----YDEFKAQFKNAAATQFGS--GWALKVTKTNA |
10 | 5cwpA1 | 0.06 | 0.06 | 2.58 | 0.58 | PROSPECTOR2 | | MSSDEEEARELIER-----AKEAAERAQEAAERTGDPRVLARELKRLAQEAAEEVKRDPSSSDVNEALKLI-VEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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