Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SAKVSAALNQVLSYIIRDFVNSWYLSISKNPAFSNEVDKALRHALLGIKDRLTSLDLAETLTTRLVPILTAHFRDFSDAERSVRGKKLNRSVTESEELDLAIASKYRDGKLHPAATLSFSDTKTAQQDYLRKMVFKILPKVLPENLLASRAVATIIREIVACAVLFPVMQMLSDPDTWNQLMEN |
1 | 5cwjA | 0.11 | 0.09 | 3.11 | 0.72 | SPARKS-K | | SEEEQERIRRILKEARKSSLRQAIEDVSQDSEVLEEAIRVILRIAKESEEALRQARAVAEIAKEASEVLEEAIRVILRIAKESG----------SEEALRQAIRAVAEKEA----------QDPRVLEEAIRVIRQIAEESGSEEARRQRAEEEIRRRAQ------------------------ |
2 | 5uot02 | 0.08 | 0.07 | 2.81 | 0.97 | FFAS-3D | | -EEVEKYEKQTFEIIVHQYIQQLVEPA---LSMLQKAMEIIQQAFINVAKKHFGEFLNQTVQSTIEDIKVKHTAKAENMIQLQFRMEQMVFCQDQIYSVVLKKVREEIFNSFTEIGI-------HLNAYFLETSKRLANQI-------PFIIQYFMLRENGDSLQKAMMQILQEKNRYSWLLQE |
3 | 1vt4I | 0.11 | 0.11 | 3.88 | 0.31 | HHpred | | QYQYKDILSVFEDAFVDNFVQDMPKSILSKEEIDHIILRLFWTLVQKFVEEVLRINYKFLM-SPI-KTEQRMTRMYIEQRDRLYNDNQVKYNVSRQPY-LKLRQALLELALDVCLSYKNCNSPETVLEMLQKLLYQIDPNWTSRSD-HSSNIKLRIHSIQAE--LRRLLKS--KPY-ENCLLV- |
4 | 4uosA | 0.12 | 0.11 | 3.86 | 0.77 | MUSTER | | NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN-SEKILKKAKE--MAEKILKMVIELAEKILKKAKEMAEKILKK-VKELGVDNEEVKKMLEKMIE------EIKKMLEKAIKKVKEMLEKMIKEIKKML-DSEKI--LKKAKEMAEKILKMVIELAEKILKKAKEMAEKILK |
5 | 4gmxC | 0.06 | 0.06 | 2.58 | 0.72 | CNFpred | | VAERNRLLSDLMQLPNMAWDTIVEQST-LDSETVKIIANIIKTNVAVCTSMGADYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTP---KVRGLRTIKKEIL--KLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNVPDARDAEVLNCMTTVVEKVMIPQGVILILQFECTLDMINK |
6 | 2pffB | 0.13 | 0.12 | 4.30 | 0.82 | HHsearch-2 | | YHVLVGDLIKFSAETLSELIREWLENPSPDKDYLLSIPISCPLIGIQLAHKLETDSWESF--------FVSVRKAITVLFFICYEAYPNTSL-PPSILEDSLE--NNEGVPSPMLSIS-NLTQEQVQDYVNKT-NSHLPAGKQVKNLVSGSLYGLNLTLRKAKVASPFHSHVPASDLINKDLVK |
7 | 2yfaA | 0.09 | 0.09 | 3.34 | 0.83 | Neff-PPAS | | DDTAAANTLAKLDAFSKQQAYLATTFKSPNVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLL-QVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRA |
8 | 6nuwJ1 | 0.12 | 0.04 | 1.34 | 0.54 | HHsearch | | SELLLISFQEFKQQLDEQQLQHWYELLQRDARVTSELEARIKQFFITLRSRLLRF-LES----------------------------------------------------------------------------------------------------------------------------- |
9 | 1pb6A2 | 0.12 | 0.08 | 2.91 | 0.82 | SP3 | | ----RQILDIWLAPLKAF---------REDFAPLAAIKEYIRLKLEVSRDYPQASLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHL-IFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR---------------------------------------- |
10 | 2bkuB2 | 0.08 | 0.08 | 3.19 | 0.76 | PROSPECTOR2 | | TDTVAETSASISTFVMDKLGQTMSVDENQLASLGKGFEKYLETFSPYLLKALNQVDVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAY--VGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDDWVIDYIKRTRSGEQQKRQLSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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