Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LLYCGEFRELGQPDKKCRCDGKPCTVGRCNFARGDNDDKCI |
1 | 1decA | 0.42 | 0.37 | 10.76 | 2.22 | SPARKS-K | | LPQCQ-----GDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
2 | 1decA | 0.42 | 0.32 | 9.32 | 0.63 | FFAS-3D | | ----------GDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
3 | 1decA | 0.42 | 0.37 | 10.76 | 1.17 | HHpred | | LPQC-----QGDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
4 | 1decA | 0.42 | 0.37 | 10.76 | 2.25 | MUSTER | | LPQCQ-----GDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
5 | 1decA | 0.42 | 0.37 | 10.76 | 2.04 | CNFpred | | LPQCQ-----GDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
6 | 1decA | 0.42 | 0.37 | 10.76 | 2.62 | HHsearch-2 | | LPQC-----QGDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
7 | 1decA | 0.42 | 0.37 | 10.76 | 3.34 | Neff-PPAS | | LPQC-----QGDDQEKCLCNKDECPPGQCRFPRGDADPYCE |
8 | 1decA | 0.43 | 0.37 | 10.73 | 3.39 | HHsearch | | LPQC-----QGDDQEKCLCNKDECPPGQCRFPRGDADPYC- |
9 | 1zvoC2 | 0.10 | 0.10 | 3.63 | 0.38 | PROSPECTOR2 | | AQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEK |
10 | 1decA | 0.42 | 0.32 | 9.32 | 0.30 | SAM | | ---------QGDDQEKCLCNKDECPPGQCRFPRGDADPYC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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