>PF02010 (463 residues) ADMRVNCPGPKSTKVSWNIYKVSNLSDKPDWSKPFNPTGIEGRHFIRLKIPCSSLDTGLY LFNFTVQLISPTFPQMIERSDAVLIEVGSDLWGAVIMGGHFRSVGFSDRWILKGSVLSNG EMVSLSQGLSYTWYCTKQERDYTSMALSTVGKCYPDQVDLKWTTSSNSIQMVLPETLQAN NTYHFLLLVQNGSRITQAQQTVHVRAHGALVLNIACTENCGTSVIPTERFSLSGKCGNCR EIKSWYYWSLRSAQSHEIKFDWSSRTTTGRSSSYLHFKAFALVSMAEEFYILSLKVVTKN GQSSSCEYFFYINAPPQIGNCVLHPKEGIAFLTKFIIQCHGFEDRNQPLAYKVIAASDQM TISSISSIQNNTLGIIIYVGHESKTPWSFLPPGRPSQTFALPIYVQVFDALGASSQVTLQ ATVLDQRQPPTNAVLHQQLYDLMNGSSALMTKLLITKDYLSIG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ADMRVNCPGPKSTKVSWNIYKVSNLSDKPDWSKPFNPTGIEGRHFIRLKIPCSSLDTGLYLFNFTVQLISPTFPQMIERSDAVLIEVGSDLWGAVIMGGHFRSVGFSDRWILKGSVLSNGEMVSLSQGLSYTWYCTKQERDYTSMALSTVGKCYPDQVDLKWTTSSNSIQMVLPETLQANNTYHFLLLVQNGSRITQAQQTVHVRAHGALVLNIACTENCGTSVIPTERFSLSGKCGNCREIKSWYYWSLRSAQSHEIKFDWSSRTTTGRSSSYLHFKAFALVSMAEEFYILSLKVVTKNGQSSSCEYFFYINAPPQIGNCVLHPKEGIAFLTKFIIQCHGFEDRNQPLAYKVIAASDQMTISSISSIQNNTLGIIIYVGHESKTPWSFLPPGRPSQTFALPIYVQVFDALGASSQVTLQATVLDQRQPPTNAVLHQQLYDLMNGSSALMTKLLITKDYLSIG | |||||||||||||||||||
1 | 4ofyD | 0.11 | 0.09 | 3.21 | 1.28 | SPARKS-K | ESITFRCSAEKSVYSQWKSNLGYHQEGILPGHQGRFSYIKQNAEELHLKITHVNLDDGEYECQMLHP-----EEGPIRAKSFLNIIVPPQLVYFSNYQPNSIAVKENTPLNITCVVPNVKPE------PEVLWYMKVMSRDVKQASTPHLNKTF----------TVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLFPPSPT---VEILRNPSALRSGDNVTIACSVTGGN-PPPDVFWYH---ENKRL----QSHSTLDTRSKEIKNIYSFIASQNDNMAEYECRANNSRPKRKAMKLEVNYP--PA--SVELFGESNIRYGSSANIQCKSLPSNPAS---QITWIINGRSVPTPQREFVVENGIVSSSCVSVH------SNELSVEAHQINVECMATNPEG-SSAKQHVIKIIA-------------------------------------- | |||||||||||||
2 | 2jllA | 0.11 | 0.09 | 3.11 | 1.60 | FFAS-3D | GQVTLVCDAEGEPEITWK--RAVDGFTFTEKSLDGRIEVKGQHGSSSLHIKDVKLDSGRYDCEAA--------SRIGGHQKSMYLDIEYAPKF--ISNQTIYYSWEGNPINISCDVKSNPPA-------SIHWR-------------RDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKII------ELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS---EIWKIVRSHGVQTMVVLNN----LEPNTTYEIRVAAVNGKGQGDYEIFQTLPVREPSPPSIHGQPSS----GKSFKLSITKQDDGGAPIEYIVKYRSQWLE----KKVQGNKDHIIL----------EHLQWTM-----GYEVQITAANRLGYSEPTVYEFSMPPKPN----------------------------------- | |||||||||||||
3 | 5iryA | 0.11 | 0.09 | 3.32 | 1.15 | MUSTER | GKVTAT-PDTLHTRLKYKILQQI-----PDHPKHFSI----HPDTGVITTTTPFLKCDTYQLIMEVRDMGGQPFGL-FNTGTITISLEDENNPPSFTETSVTEVEENRIVEILRMKVQDQDLPTPHSKAVYKILQGNENGNF----------------IISTDPNTNEGVLCVVKPLEVNRQVILQVGVINEPTMCTTTVTVKIIDSEGPECHPPVKVIQSQDGFPAGQELLGYKALDPEISSGGLRYQKLGDEDNWFEIN--------QHTGDLRTLKVESKFVKNNQYNISVVAVDAVGRSCTGTLVVHLDHAPQDKEVTICQNNEDFAVLKPV---PDGPENGPPFQFFLD--NSASKNWNIEEKDGKT---------------AILRQRQNLDYNYYSVPIQIKDRHGLVATHMLTVRVCDCSTPSEC------------------------------- | |||||||||||||
4 | 4p99A | 0.08 | 0.06 | 2.40 | 3.01 | CNFpred | VAVSGTATG-EGDTVTLEINGE-------TYTTTVDA-----NGEWSVDVAGSDLADTAFDAVVTSSDAA---GNTVDTTGSSTHTVDTEATAGTVTVNADDVINAAGTVAVSGTATGG----DIAEGDTVTLEING---ETYTTTVDA----------------GEWSVDVAGSDLAADTAFDAVVTSSDAGNTVDTTGSSTHTVDTATAGTVTVNAISDDVINAAGTVAVSGTATGGIAEGDTVTLEIN---GETYTTTVD-------GEWSVDVAGSDLA--ADTAFDAVVTSSDANTVDTTGSSTHTVDTEATAGTVTVNAIDDVIN-GTVAVSGTATIAEGDTVTLEING------ETYTTTVDA--NGEWSVDVAG----SDLAA------DTAFDAVVTSSDAAGNTVDTTGSSTHTVD------------------------------------- | |||||||||||||
5 | 4p99A | 0.07 | 0.06 | 2.53 | 1.79 | Neff-PPAS | DDVINASEAAGTVAVSGTATGGDIAEGDTEINGETYTTTVDANGEWSVDVAGSDLADTAFDAVVTSSD---AAGNTVDTTGSSTHTVDTEATAGTVTVNA-------------ITSDDVINASEAAGTVAVSGTATG---GDIAEGDTVTLEINGETYTTTVDANGEWSVDVAGSDLAADTAFDAVVTSSDAGNTVDTTGSSTHTVDTEATAGTVTVNAITSDDVIAGTVAVSGTATGGDIAEGDTVTLEINGETYTTTVDAN---------GEWSVDVAGSDLAADTAFDAVVTSSDAAGVDTTGSSTHTVDTEATAGTVTVNAITSDDVIN--------ASEAAGTVAVSGTATGGDIAEGDTVTLEINGETYTTTVDANG-EWSVDVAGSDLAADTAFDAVVTSSDAAGNTVDTTGSSTHTVD------------------------------------- | |||||||||||||
6 | 4ofyD | 0.12 | 0.10 | 3.38 | 1.56 | PROSPECTOR2 | FSITFRCSPEPIVYSQWKSNTGSLLGYHQEGILPGHQGRKQNAEELHLKITHVNLDDGEYECQMLH-------PEEGPIRAKSFLNIIVPPQLVYFSNNSIIAVKENTPLNITVVPNVKPEP-------EVLWYMKVMSRDVKQASTPHLNKTF----------TVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLPPSDPTVEI---LRNPSALRSGDNVTIACSVTGGNPPP-DVFWYHENK-----RLQSHSTLDTRSKEIKNIYSFIASQNDNMAEYECRAN----NSRPKRKAMKLEVNYPPAS--VELFGESNIRYGSSANIQCK-SLPSNPASQITWIINGRSVPTPTQREFVVENGIVSSSC-------VSVHSNELSVEAHQINVECMATNPEG-SSAKQHVIKII--------------------------------------A | |||||||||||||
7 | 5erpA | 0.12 | 0.10 | 3.49 | 1.22 | SPARKS-K | FTIFENCRVGTVGQVC---ATDKDEPDTMHTRLKYSIIGQVHPTTGVITTTSSQLDIDKYQLKIKVQDMDGQ-YFGLQTTSTCIINIDRTSYVTSVEENTVDV----EILRVTV---EDKDLVNANWRANYTILKGNENGNFKIVTDAKTN---------------EGVLCVV-KPLNYKQQMILQIGVVNESAMSTATVTVNVEDQDGPECN---PPIQTVRMKENATTSNGYKAYDPETRSIRY-----KKLTDPTGW-----VTIDENTGSIKVFLDREAETIKGIYNITVLASDQGGRTCTGTLGIILQNSPPKKTVIICKPTMSS----AEIVAVD-PDEPPPFDFSL------------ESSTSEVQRMWRLKAINDTAARLSYQNDPPFGSYV--VPITVRDRLGMSSVTSLDVTLCDCITENDCT------------------------------ | |||||||||||||
8 | 4ofyD | 0.10 | 0.08 | 2.98 | 1.51 | FFAS-3D | ESITFRCSAEKSVYSQWKSNTGYHQEGILPGHQGRFSYIKQNAEELHLKITHVNLDDGEYECQML-------HPEEGPIRAKSFLNIIVPPQLVYFSPNSIIAVKENTPLNITCVVPNVK------PEPEVLWY--------MDGKVMSRDVKQASTPHLNKTFTVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLFPPSDPTVEI--LRNPSALRSGDNVTIACSVTGGNPPP-DVFWY---HENKRLQSHSTLDTRSKEIKNIYSFI--ASQNDNMAEYE--CRANNSRPKRKAMKLEVNY--PPAS--VELFGESNIRYGSSANIQCKSLPSNPAS-QITWIINGRSVPTPTQREFVVENGIVSSSCVS-------VHSNELSVEAHQINVECMATNPEG-SSAKQHVIKIIA-------------------------------------- | |||||||||||||
9 | 4ofyD | 0.13 | 0.10 | 3.62 | 1.15 | MUSTER | ESITFRCSAEKSVYSQWKLLGYHQEGILPGHQGRFSYI-KQNAEELHLKITHVNLDDGEYECQMLHP-----EEGPIRAKSFLNIIVPPQLVYFSYQPNSIIAVKENTPLNIT-------VVPNVKPEPEVLWYMDGKVMSRDVKQASTP--------HLNKTFTVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVLF-PPSDPTVEILRN-PSALRSGDNVTIACSVTGGNPPP-DVFWYHE---NKRLQSHSTLDTRSKEIKNIYSFIAS--QNDNMAEYECRAN----NSRPKRKAMKLEVNYPPAS--VELFGESNIRYGSSANIQCK-SLPSNPASQITWIINGRSVPTPTQREFVVENGIVSSSCV-------SVHSNELSVEAHQINVECMATNPEG-SSAKQHVIKIIA-------------------------------------- | |||||||||||||
10 | 4d93A | 0.06 | 0.06 | 2.40 | 2.83 | CNFpred | YTLVISNFNLSKVDLLLKLEGETDNLSVLNVTKMVDVRR---NMNRMINFNMEELTAGNYKITIDGQRG-------FSFHKEAELVYLSKSISGLIQVD-KPVFKPGDTVNFRVI-LLDTELKPPARVKSVYVTIRDP--QRNVIRKWSTAKLY-----AGVFE---SDLQIVPTPM--LGVWNISVEVE---GEELVSKTFEVKEYVLSTFDVQVMPS-VIPLEEHQAVNLTIEANYHKPVQGVAKVELYLD-DDKLNQKKELTVY---GKGQVELRFDNFAMDDQQDVRVKVSFIEQYNRTVVKQSQITVYRY--AYRVELIKESPQFLPFKCALQFTHH-AKGITGKVEVETTTTSDGLIKLELQPSEGTEQLGINFNAGFFFYEDVNKVETVTDAYIKLELKSPIKRNKLMRFMVTCTERMT---------------------FFVYYVMSKGNIIDAG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |