Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | TYSDPMASLSGLFWILLFLYLIFAPQLKHQQLLAARRRAMRRIGMKRGSNVITMIHRQESIGFLGIPIYRFIDIDDSEKVLRAIRSTPKDKPIDLIIHTPGGLVLAATQIAKALHDHPAKTTVIVPHYAMSGGTLIALAADEILIDPHAVLGPVDPQLMNYPAPSILKVVEKKEPKDIDDKTLIMADIAEKAINQVRETVFNLLKDKMDEEKAREVAKILTEGRWTHDYPLTVEELRQLGLKVSTDVPEEVYELMELYPQPMMQRHPGVEFVPSPPKGE |
1 | 1q51B1 | 0.13 | 0.09 | 3.10 | 1.14 | SPARKS-K | | --------------------------------NPFDAKAWRLVDGFDDLTDITYHRHVVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASEYARFKQT---------------DADVGS-FDGG------------------YGSAYLARQVGQKFAREIFFLGRT--------YTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK-------------- |
2 | 3rstA | 0.16 | 0.13 | 4.15 | 1.69 | FFAS-3D | | ------------------------------------------------SSKIAVLEVSGTI-----QDNDGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK---IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK-DHKDLKNASVISY-------- |
3 | 3rstA | 0.20 | 0.14 | 4.60 | 2.53 | HHpred | | -----------------------------------------------PSSKIAVLEVSGTIQDND--------GYNHRTFLKNLERAKDDKTIVLKVNSPGGGVYESAEIHKKLEEIKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIME---SVNYSKLADKLGISDIMSPSREMTKEEKNIMQSMEGFVDVISGRGMPKAEVKKIAD----GRV-----YDGRQAKKLNLVDELGFYDDTITAMKKDHDLKN--ASVISYE------- |
4 | 3rstA | 0.17 | 0.13 | 4.35 | 1.25 | MUSTER | | -----------------------------------------------PSSKIAVLEVSGTIQDNDGY-----NHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRPKAEVKKIADGRV-----YDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKN----ASVISYE---- |
5 | 3p5mA | 0.16 | 0.10 | 3.32 | 1.20 | CNFpred | | ---------------------------------------------------ISVEHDVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDG----------------------------------GASALLPLLIGRARTSRMAMTA--------EKISAATAFEWGMISHITSADEYESVLTDVLRSVSG--------------- |
6 | 3bezD | 0.16 | 0.14 | 4.76 | 0.55 | HHsearch-2 | | PFSPADSRWIGELWQN-YLNTVANRQDTAKYAAEIEKALTKEFGPADTGDSIGVVFANGAI-DGEET-QGNVGGDT---TAAQIRDARLDPKVKLRVNSPGGSVTASEVIRAELAAAGKPVVVSGG--AASGGYWISTPANYIVANPSTLTGSIGI-FGVI--TTVENSLDSIGVHDV-SITRALPPEAQ-LQLSYKRFITLVAARHSTPEQIDKI---------AQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVK-Q--WHLEYYV------ |
7 | 3rstA | 0.17 | 0.13 | 4.34 | 1.46 | Neff-PPAS | | -----------------------------------------------PSSKIAVLEVSGTIQDN-----DGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGKAEVKKIADGRYDGRQAKKLNLVDELG--FYDDTITAMKKDHKDLKNASVISYE------------ |
8 | 4fzwA1 | 0.14 | 0.09 | 3.05 | 0.85 | HHsearch | | ----------------------------------------SEL-IVSRQQRVLL------LTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARLNERPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGG----------------------------------TQRLIRSVGKSLASKMV--------LSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMAR-H------------- |
9 | 3rstA | 0.17 | 0.13 | 4.13 | 1.58 | PROSPECTOR2 | | -----------------------------------------------PSSKIAVLE------VSGTIQDNDGY--NHRTFLKNLERAKDDKTVKGIVNSPGGGVYESAEIHKKLEEIKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISAHADIMSPSREMTKEEKNIMQSMVDNSYEGFGRGMPKAEVKKI---------ADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKN--------ASVISYE |
10 | 2np9A | 0.15 | 0.09 | 2.90 | 2.47 | SAM | | ----------------------------------------------------------ARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGGRVFSA-KLVRGSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAA-----------------------------------NLRLGRFAGPRVSRQVI--------LEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLD---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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