Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | KNENYSSVDSSRLSDSEVKEVLEKSKESFKSELASTDEHFVYHIIFFLIRCAKISTSEKVKYVGSHTYVVDGKTYTVLDAWVFNMMKSLTKKYKRVNGLRAFCCACEDLYLTVAPIMSERFKTKAVGMKGLPVGKEYLGADFLSGTSKLMSDHDRAVSIVAAKNAVDRSAFTGGERKIVSLYDLGRY |
1 | 5fn1A | 0.13 | 0.11 | 3.87 | 1.18 | FFAS-3D | | KKVKYVSTVTSVATPAEIEALGKIFTAM-----GLAANETGPAMWDLARAYADVQSSKSAQLIGAT-----PSNPALSRRALAAQFDRI------NITPRQFCMYFAKVVWNILLDSNIPPAN--WAKLGYQEDTKFAAFDFFDGVTNPANEKELAAHSVAKYGALARQKISTGN------------ |
2 | 5fn1A | 0.14 | 0.13 | 4.35 | 1.04 | HHpred | | KV-KYVSTVTSVATPAEIEALGKIF-T----AMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPS---N--PALSRRALAAQFDRI------NITPRQFCMYFAKVVWNILLDSNIPPAN--WAKLGYQEDTKFAAFDFFDGTIRQPNEKELAAHSVAKYGALARQKIS-TGNYITTLGEVTR- |
3 | 5fn1A | 0.14 | 0.12 | 4.21 | 1.59 | HHsearch-2 | | KVK-YVSTVTSVATPAEIEALGKIF-TA----MGLAANETGPAMWDLARAYADVQSSKSAQLIGATPS---N--PALSRRALAAQFDRI------NITPRQFCMYFAKVVWNILLDSNIPPAN--WAKLGYQEDTKFAAFDFFDGTIRQPNEKELAAHSVAKYGALARQKIS-TGNYITTLGEVRGH |
4 | 5a2tA | 0.10 | 0.09 | 3.33 | 2.52 | HHsearch | | DLAEPKPASANVPNTKQWIGIQAGLIK-----AGATDANFMKVLLGLSLEAFDRGSSEATTWDGIT----EG----VEHRAAANAIKEA------NCPIHKVTYYLAKPTFAIRQSKNLPPAN--FAKKNVPSQYKWCAFDAFDGPYDAPSEIDRMAYATFKTIQIKIANDQ-KGFNLNYNPNVQA- |
5 | 5a2tA | 0.12 | 0.10 | 3.63 | 1.13 | FFAS-3D | | AAIEPKPASANVPNTKQWIGIQAGLIK-----AGATDANFMKVLLGLSLEAFDRGSSEATT--------WDGITEGVEHRAAANAIKEA------NCPIHKVTYYLAKPTFAIRQSKNLPPAN--FAKKNVPSQYKWCAFDAFELPYDAPSEIDRMAYATFKTIQIKIANDQKGFNLNYN-PNVARL |
6 | 5a2tA | 0.11 | 0.10 | 3.48 | 1.59 | HHsearch-2 | | AIEP-KPASANVPNTKQWIGIQAGLIK-----AGATDANFMKVLLGLSLEAFDRGSSEATTWDGIT----EG----VEHRAAANAIKEA------NCPIHKVTYYLAKPTFAIRQSKNLPPAN--FAKKNVPSQYKWCAFDAFDGPYDAPSEIDRMAYATFKTIQIKIANDQ-KGFNLNYNPNTQAR |
7 | 5fn1A | 0.14 | 0.13 | 4.35 | 2.52 | HHsearch | | KV-KYVSTVTSVATPAEIEALGKIF-TA----MGLAANETGPAMWDLARAYADVQSSKSAQLIGATPS---N--PALSRRALAAQFDRI------NITPRQFCMYFAKVVWNILLDSNIPPAN--WAKLGYQEDTKFAAFDFFDGTIRQPNEKELAAHSVAKYGALARQKIS-TGNYITTLGEVTR- |
8 | 4doxA | 0.12 | 0.09 | 3.20 | 1.02 | FFAS-3D | | SSIKVDPTSNLLPSQEQLKSVSTLMVA-----AKVPAASVTTVALELVNFCYDNGSSAYTTVTGPSSI------PEISLAQLASIVKAS------GTSLRKFCRYFAPIIWNLRTDKMAPANWE---ASGYKPSAKFAAFDFFDGLTRSPTQEERIANA---------------------------- |
9 | 4doxA | 0.12 | 0.09 | 3.20 | 1.15 | HHsearch-2 | | SIK-VDPTSNLLPSQEQLKSVSTLMV-----AAKVPAASVTTVALELVNFCYDNGSSAYTTVTGPSSI--P----EISLAQLASIVKAS------GTSLRKFCRYFAPIIWNLRTD-KMAPAN--WEASGYKPSAKFAAFDFFDGVTRSPTQEERIANATN-------------------------- |
10 | 5odvA | 0.16 | 0.14 | 4.79 | 1.96 | HHsearch | | HLLEYKPLFNTRATKTQFESWYSAVKVE----YDLNDEQMGVIMNGFMVWCIDNGTSPDVN--G--VWVMDGEQVEYP---LKPIVENAK--P----TLRQIMHHFSDAAEAYIEESPYMPRY--GLLRNLRRELARYAFDFYEVTS-KTPNRAREAIAQMKAAALAGINSRGLDGNISTNSENER- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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