Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | FQTNMDCNANEEVDQKFDFMFCHNDTGNLWVMGQYNVNGDEVIKHWTHCNTNNDCGEGLVCVKEDLCRYRCYDDP |
1 | 3di2D1 | 0.14 | 0.13 | 4.59 | 0.81 | SPARKS-K | | DDYSFSCYSQLEVNGSQHSLTCATTNLEFEICGALVKCLNFRKLQEIYFIETKKFGKSNICVKVGEKSLTCKKI- |
2 | 2ocwA4 | 0.12 | 0.12 | 4.21 | 0.35 | FFAS-3D | | -TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINSDAGQYLCQAG- |
3 | 5u1lA | 0.21 | 0.16 | 5.07 | 0.30 | HHpred | | -----------------DYTF-PLQGNSFFVMTNFIKEGQQQGLARTICSSDRGCKKGGRCVVYKERLKTCEVS- |
4 | 5fmaA | 0.18 | 0.17 | 5.64 | 0.66 | MUSTER | | FHQDVNCGEKPGLCRHG--GTCHNEVGSYRCVCRATHTGPNCERPYVPCSPS-PCQNGGTCRPTGDVTHECACLP |
5 | 5xmzA | 0.12 | 0.11 | 3.76 | 0.65 | CNFpred | | --NVITCGES-----KYRFALSSGKQYEFALSLYHELGFYGTGEIFTHCRAGG--LGDFICQQQNPTTIVIDSLP |
6 | 2ndiA | 0.24 | 0.09 | 2.91 | 0.47 | HHsearch-2 | | ----------------------------------------------GLCSENGDCAADECCVDTVFVTRSCEKTT |
7 | 1imtA | 0.13 | 0.12 | 4.16 | 0.97 | Neff-PPAS | | -VITGACERDLQSLWIKSVRVCTPVGTS----GEDCHPASHKIPFSGQRMHHTPCAPNLACVQTSPKKFKCLSK- |
8 | 2hlgA | 0.20 | 0.08 | 2.56 | 0.52 | HHsearch | | --------------------------------------------LNEPCSSNSDCIGITLCQFKTDQYGTCNLL- |
9 | 1imtA | 0.13 | 0.12 | 4.17 | 0.93 | SP3 | | CERDLQCGKGTVSLWIKSVRVCTPVGTS----GEDCHPASHKIPFSGQRMHHTPCAPNLACVQTSPKKFKCLSK- |
10 | 1nysA | 0.15 | 0.15 | 4.92 | 0.44 | PROSPECTOR2 | | YYNANWELER---TNQSGLERCEGDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVAENPQVYFCTHLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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