>PF01528 (373 residues) HQMDTLNWRIWIIQVMMFTLGAVMLLATLIAASSEYTGIPCFYAAVVDYELFNATLDGGV WSGNRGGYSAPVLFLEPHSVVAFTYYTALTAMAMAVYTLITAAIIHRETKNQRVRQSSGV AWLVVDPTTLFWGLLSLWLLNAVVLLLAYKQIGVAATLYLGHFATSVIFTTYFCGRGKLD ETNIKAVANLRQQSVFLYRLAGPTRAVFVNLMAALMAICILFVSLMLELVVANHLHTGLW SSVSVAMSTFSTLSVVYLIVSELILAHYIHVLIGPSLGTLVACATLGTAAHSYMDRLYDP ISVQSPRLIPTTRGTLACLAVFSVVMLLLRLMRAYVYHRQKRSRFYGAVRRVPERVRGYI RKVKPAHRNSRRT |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | HQMDTLNWRIWIIQVMMFTLGAVMLLATLIAASSEYTGIPCFYAAVVDYELFNATLDGGVWSGNRGGYSAPVLFLEPHSVVAFTYYTALTAMAMAVYTLITAAIIHRETKNQRVRQSSGVAWLVVDPTTLFWGLLSLWLLNAVVLLLAYKQIGVAATLYLGHFATSVIFTTYFCGRGKLDETNIKAVANLRQQSVFLYRLAGPTRAVFVNLMAALMAICILFVSLMLELVVANHLHTGLWSSVSVAMSTFSTLSVVYLIVSELILAHYIHVLIGPSLGTLVACATLGTAAHSYMDRLYDPISVQSPRLIPTTRGTLACLAVFSVVMLLLRLMRAYVYHRQKRSRFYGAVRRVPERVRGYIRKVKPAHRNSRRT | |||||||||||||||||||
1 | 6ei3A2 | 0.07 | 0.06 | 2.59 | 1.03 | SPARKS-K | ----PRQIPFIIGNEACERFSFYGMRNILVQFLITSLLL---------------------QEVGAPERDAEAKHILHSFMIGVFFFKYTTIIWFSLIYCAGHACLALFE--DSRSGFFVGLGLIAFGAGGIKPLVASFMVDQFAKVVFDAFYWIINFGSLFASLLIPLALKHFGIPGILMFIATAVFWLGRKRYVVTPFFSLFDQKASTWVLQGFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLSLRRMTSGIAFSGVAWIAVGAIQVAMDWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRTVTSHIADTGLSEAAFLFFFAAFAFLAALAFGLYARRYRMV | |||||||||||||
2 | 3mktA | 0.08 | 0.06 | 2.57 | 1.28 | FFAS-3D | HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIM--AG-----------------------------------GVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQAMATKTVGYMHAVIFAVPAYLLFQALRMVIGFIGL------LLNIPLNWIFPELGGVGCGVATAIVYWIMLLLLLFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMS-IGAAVSIRVGHKLGTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLR----------GYKDMTAIFHRTFISY---------- | |||||||||||||
3 | 3rkoB | 0.14 | 0.11 | 3.87 | 1.49 | CNFpred | -----------LSLTMLSVVTGVGFLIHMYASWYMEEGYSRFFAYTNLFI---ASMVVLVLADNLL---LMYLGWEGVGLCSYLAMKAFVVTRVGDVFLAFALFILYNE-----LGTLNFREMV-MLMWATLMLLGGAVGKSAQTWLADAMAGPTPVSALIHAATMVTAGVYLIAR---THGLFLMTPEVLH-LVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACMGGLRIPLVYLCFLVGGAALSAAGFFSKDEILAGAMAN---HINLMVAGLVGAFMTSLYTFRMIFIVFHG----------------------------------- | |||||||||||||
4 | 6ei3A | 0.05 | 0.05 | 2.22 | 1.05 | Neff-PPAS | --LKHLGPSWAFGIPGILMFIATAVFWLGRKRYVRVPLHGFGAVVRSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLL-IPFNNLVLYPLLRRLGWE----PTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLSEAAFLMFFFAAFAFLAALAFGLYARRYRMVDNYRPANLYFQ----------------------- | |||||||||||||
5 | 3wajA1 | 0.09 | 0.09 | 3.25 | 1.18 | PROSPECTOR2 | SVL-----------VIAALISVKLRILNPWNSVFTWTVRLGGNENTIHNFPHRIWFDPFTYYPYGSYTHFGPFLATSGESLRAVLIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIALSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMVSAVYSALALSVVFDKLHFRVAF-------------ALLIALAAIYPTYILADAQSSYAGGPNKQWYDATPDGEKYDEYYLQLYPTPQSNKEP | |||||||||||||
6 | 5y50A | 0.11 | 0.10 | 3.49 | 1.01 | SPARKS-K | NSSMYVLQVISIMMVGAIAVSFCSVTGFSVVFGLAS-ALETLCGQANGAKQY-----------------------EKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQEAGKFATWLIPALFGYATLQPLVRFFQALCWSLVLGAAIAIGVSYWLNVTVLGLYMTFSMSLFEGMGEFFRFGIPSASMICLEWWSFEFLVLLSGISVCLSTQSSLYQIPESLGAAASTRVANELGTAMVITGVESIMVGAIVFGYVKSMAPLLSLSVIFDALHAALSGVARGGRQDIGAYVNLAAYYLFGIPTAILLAGLWIGITVGSCVQAVLLGLIVIL------TNWKKQARKARERVM------------ | |||||||||||||
7 | 1pv6A | 0.11 | 0.10 | 3.56 | 1.26 | FFAS-3D | --MYYLKNNFWMFGLFFFFYFFIMGAYFPF--------FPIWLHDINHISKSDTGIIFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFLWFLSLYVIGVSCTYD------VFDQQFANFFTSFFATGEQ----GTRVFGYVTTMGELLNASIMFFAPLIINR---IGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQRFSATIYLVCFCFFKQLAMIFMSVLAAYLVLGLVALGFTLISVFTLSGPGPLS------LLRRQVNEV-------------- | |||||||||||||
8 | 5gpjA | 0.10 | 0.08 | 3.10 | 1.44 | CNFpred | SEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVE---PQACSYDK---------------------KTCKPALATAIFSTVSFLLGGVTSLVFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYDWGGLFEAITGYGLGGSSMALFGRVG--GGIYTKAADVGAD-PAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDF-EIEPALKKQLVISTVLMTIGVAVVSFVALTSFTIFNQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSN------AYSPVQDV--------------------- | |||||||||||||
9 | 3gi9C | 0.09 | 0.08 | 3.17 | 1.05 | Neff-PPAS | --PIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLIAPIN---TFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIPKKNVPRAIFISILIVMFVYVGVAISAIGNASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLF-----NMEGVASITSAVFMVIYLFVILSHYILIDEVGGLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKSLES------------------- | |||||||||||||
10 | 6eznF1 | 0.09 | 0.08 | 3.14 | 1.18 | PROSPECTOR2 | SCVLSVFQTILKLVIFVAIFGAAISSRLFAVIKFESIIHEFFNYRATKFLNWFDDRTWYPLGRVTGGTLYPGLMTTSAFIWHALRIRNVCVLFAPLFSGVTAWATYEFTKEIKDASAGLLASYDNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKIFDI--------YLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTA-------------------------------YS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |