Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLISVIRARNYVEATSRYNHFHARLEGTPPSELRQ |
1 | 5efrA2 | 0.17 | 0.17 | 5.50 | 0.96 | SPARKS-K | | SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNEYLLAASEYERFIQIYQIDPRVPQAE |
2 | 5waqA1 | 0.13 | 0.09 | 3.13 | 0.48 | FFAS-3D | | --------------------AVKLYEILESRFPTSRHARQSQLDTAYAYKDDEKDKALAAIERFRRLHPQHPNMD--- |
3 | 3bu8B | 0.16 | 0.13 | 4.28 | 0.29 | HHpred | | ----------AEL--TPLESAINVLEMIKTEFTLTEAVVESSRKLVKEIKNKEFEKASKILKKHMSKDPTTQ--KLRN |
4 | 2zblB | 0.16 | 0.15 | 5.14 | 0.66 | MUSTER | | SWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKW-LDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKD |
5 | 5e4rA | 0.16 | 0.12 | 3.83 | 0.52 | CNFpred | | ------------VGGIMELIKASFETLVEEGYQPEVAYFETVNELKLIVDLIYEKGLTGMLRAVSDTA---------- |
6 | 5dseA1 | 0.23 | 0.21 | 6.45 | 0.37 | HHsearch-2 | | ----VIAEYLEDV--ITGDIALLYLQEIE-RVLGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRM |
7 | 2fi7A2 | 0.13 | 0.10 | 3.54 | 0.76 | Neff-PPAS | | ----------------EYVPARQYYDLFAQGGGQN--ARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQ |
8 | 5dseA1 | 0.23 | 0.21 | 6.42 | 0.60 | HHsearch | | KGLCL-----EDV--ITGDIALLYLQEIER-VLGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLR- |
9 | 2ff4A3 | 0.19 | 0.14 | 4.55 | 0.89 | SP3 | | ---------ASA--------VIAELEALTFEHPYR---EPLWTQLITAYYLSRQSDALGAYRRVKTTLAGIDGPTLRA |
10 | 2kkpA | 0.12 | 0.12 | 4.10 | 0.42 | PROSPECTOR2 | | MIEPSKITVQSTWESYETVLR-LHVIPTLGSIPLKKLQPADIQRLYASKLESGLSPTRVRYEAAKPPRHPLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|