Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | VGVAVSFTATLVCVIAAPMLYNYMQHMQSVMQSEVDFCRSRSSNIWREV |
1 | 5cwqA2 | 0.08 | 0.08 | 3.20 | 0.70 | SPARKS-K | | VLALALIAIALAVLALAEVACCRAERAYEDARRVEEEARKVKESAEEQG |
2 | 1t9sA2 | 0.15 | 0.14 | 4.82 | 0.56 | FFAS-3D | | -KNKIPSMQVGFIDAICLQLYEALTHVSEDCFPLLDGCRK-NRQKWQAL |
3 | 5sv0B | 0.16 | 0.14 | 4.78 | 0.19 | HHpred | | -GIAEALATAIGLVAAIPAVYNVFARQIGGFKAMLGDVAAQVLLLQ--- |
4 | 5tohA | 0.12 | 0.12 | 4.29 | 1.07 | MUSTER | | WDQLIVKRTLADLLIPINRQISDIQSTLSEVTTRVHEIERQLHEI-TPV |
5 | 4ziwA | 0.10 | 0.10 | 3.76 | 0.52 | CNFpred | | INTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQI |
6 | 5gmkq1 | 0.18 | 0.12 | 4.00 | 0.30 | HHsearch-2 | | ---------------SIPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKL |
7 | 6em5z | 0.04 | 0.04 | 2.08 | 0.84 | Neff-PPAS | | -SSHLNAKSVKRRGVFQKAVDAREQRISDKLKEDLLKQKLEDLKKKEEQ |
8 | 1q88B1 | 0.17 | 0.08 | 2.69 | 0.39 | HHsearch | | ------------------------MCIGNSTPNEQETFRAKVDEIWFR- |
9 | 2kncB | 0.14 | 0.14 | 4.86 | 0.81 | SP3 | | LVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTA |
10 | 4uicA7 | 0.06 | 0.06 | 2.65 | 0.42 | PROSPECTOR2 | | IYDITVAMKAREAQDAVKAALDQVNQYVSKVKAELQKAAQDAKAAYEAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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