>PF01446 (256 residues) LRLHQAWFCKSKLCPICNWRRSMKYGVQLGQIIDVAREREPKAKFIFLTLTVKNVSGEKL GEELTNLTKSFDRLFRRAKVKKAVIGYLRAIEVTYNAERDDYHPHIHVLLMVKASYFKKT EYYISQDEWTTMWQQSAKLDYKPIVDVRKVKPNQRKAKNEMDLRGAIVETAKYPTKPIEK MGKTEKQKLKVTDDLMKALKNKRQIGFGGLFKEIRKELQLEDVENGDLVHIDDENEESSL GVEIVAQWNWERMTYV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LRLHQAWFCKSKLCPICNWRRSMKYGVQLGQIIDVAREREPKAKFIFLTLTVKNVSGEKLGEELTNLTKSFDRLFRRAKVKKAVIGYLRAIEVTYNAERDDYHPHIHVLLMVKASYFKKTEYYISQDEWTTMWQQSAKLDYKPIVDVRKVKPNQRKAKNEMDLRGAIVETAKYPTKPIEKMGKTEKQKLKVTDDLMKALKNKRQIGFGGLFKEIRKELQLEDVENGDLVHIDDENEESSLGVEIVAQWNWERMTYV | |||||||||||||||||||
1 | 1bxcA | 0.11 | 0.11 | 3.80 | 0.64 | SPARKS-K | GNLFSDPGFKDGGFTSRDPWVRAYAFRKSLETMDLGAEL--GAEIYVVWPGREGAEVEGKARVWDWVREPLNFMAAYAEDQG--YGYRFALEPKPNEPRGDIYFAFGLNPEFAHETMAGLN-------FVHAVAQALDAGKLLHIDLNGQRMNRFDSENLKAAFLLVDLLESRHFDAHALRTEDEEGVWAFARGCMRTYLIAEAFREDPEVKELLAAYYQEDPAALPLM--DPYSHEKAEALKRAELPLEAKRHRG | |||||||||||||
2 | 3qwvA2 | 0.13 | 0.07 | 2.59 | 0.66 | FFAS-3D | -RLRDSYFCE---CRECTAEAIRDMVRYARNVIEEFRRAKHYK------------SPSELLEICELSQEKMSSVFEDSHMMYQAM-------------------------GVCLYMQDWEGALKYGQKIIKPYSKHYPVYS-------------------LNVASMWLKLGRLYMGLENK-----AAGEKALKKAIAIMEGKD----HPYISEIKQEIE------------------------------------- | |||||||||||||
3 | 2x3gA | 0.12 | 0.05 | 1.80 | 0.45 | HHpred | ------------------------DLKKVLNFHF------SYIYTYFITITTNYKYG-DTEKIFRKFRSYIYNH-------DKNSHVFSIKET---S--NG--LHYHILVFTNKKLD--------YSRVHKH-------PSHSDIRIELVPKS----------ISDIKNVYKYL-KTKKDIK-------------------------------------------------------------------------- | |||||||||||||
4 | 2is6A | 0.13 | 0.11 | 3.95 | 0.67 | MUSTER | KKLWTDGADGEPI-SLYCAFNELDEARFVVNRIKTWQDN--GGAL-CAILYRSNAQSRVLEEALLQAIYGGMRFFERQEIKD-ALSYLRLI---VNRNDDA------AFERV----VNTPTRGIGDRTLDVVRQTSRDRQLTL---WQACRELLQEKALAGRAASALQRFMELIDALAQETADMP--LHVQTDRVIKDSGLRTMYEKGEKGQTRIENLEE----VTATRQFSYNEEDLMPLQAFLSHAALEAGEGQ | |||||||||||||
5 | 4gxwA | 0.06 | 0.04 | 1.74 | 0.63 | CNFpred | ---------------HVLRALDRYLLTDLRRIAYEYLEDAANVRHAEFFWNPTGTVGIPYADAQAAIVTGMRDAARDF-----GIGARLIPSIDREQDPDEAV-VAGIGIDYRENDR-------PPELFWKAYRDARAA--GFRTTAHAGEFGMPW----RNVETAVDLLHDRVDHGYTIV-----DNPELCARYAER---GIVFTVVPTNSYYLRTL-------------------------------------- | |||||||||||||
6 | 2x3gA | 0.11 | 0.05 | 1.71 | 0.70 | HHsearch-2 | -----------------------GDLKKVLN---FHF---SYIYTYFITITTNYKY-GDTEKIFRKFRSYIYN-------HDKNSHVFSIKET--SN---G--LHYHILVFTNKKL--------DYSRVHKH-----PS--HSDIRIELVPK----------SISDIKNVYKYL-KTKKDIKS------------------------------------------------------------------------- | |||||||||||||
7 | 5cwmA | 0.11 | 0.09 | 3.24 | 0.68 | Neff-PPAS | --------------PEDELKRVEKLVKEAEELLRQAKEKGS------------EEDLEKALRTAEEAAREAKKVLEQRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER--------------------- | |||||||||||||
8 | 2x3gA | 0.11 | 0.05 | 1.71 | 0.79 | HHsearch | -----------------------GDLKKVLN---FH-F--SYIYTYFITITTNYKY-GDTEKIFRKFRSYIYNH-------DKNSHVFSIKET--S---NG--LHYHILVFTNKKLD--------YSRVHKH-----P--SHSDIRIELVPK----------SISDIKNVYKYL-KTKKDIKS------------------------------------------------------------------------- | |||||||||||||
9 | 3k07A3 | 0.08 | 0.06 | 2.47 | 0.71 | SP3 | ILRSGKN--------------AREVIAAVKDKLETLKSSLPNEGDLLYMPSTL--PGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMVE----TTIQLKPQEQWRPG--MTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIGIK-----------VSGTVLADIDAMAEQIEEVART------------------VPGVAS---ALAERLEGGRYSTGPSMLKTENA-RPTS | |||||||||||||
10 | 1oltA1 | 0.12 | 0.11 | 3.98 | 0.76 | PROSPECTOR2 | QQIDWDLACGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG----GTPTYLNKAQISRLMKLLRE---NFQFNADAEISIEVDPREIELDVFNRLSMVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTIDLIYG----LPKQTPESFAFTLKRVAEAQRKIKDADLPSPQQKLDILQETIAFLSGYQFIGMDDELAVAQREGVLHRNFQGYTTQGDTGD--------CYAQNQKELKQYY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |