Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | TSQVISSLSSAQKYFEANKGELNKNNVINILKDGYNSDPNKTVNALLAGWKYTLMDQKLLENNLDPSRFKNTFGPNKNKDDVTP |
1 | 2ip6A | 0.12 | 0.11 | 3.81 | 0.77 | SPARKS-K | | KQQALDLFTRLQFLLQKHDTIEPYQYVLDILETGISQTPERQARVVYNKIASQALVDKLFTA--EENKVLAAINELAHS----- |
2 | 5lnkg | 0.07 | 0.07 | 2.88 | 0.66 | FFAS-3D | | -RRVREWYREVPNTVHLFQLDISVKQGRDKVREMFKKNAHRVVDLLVIKGKMEL--EETINVWKQRTHVMRFFHETEAPRPKD- |
3 | 1whuA | 0.06 | 0.05 | 2.14 | 0.34 | HHpred | | --KYTKIIEKLYAVVSRDAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSIILNEYCD----------GRDSGPSSG |
4 | 5cwfA2 | 0.11 | 0.11 | 3.83 | 0.79 | MUSTER | | MAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVENNSDEMAKKMLELAKRVLDAAKNNDDET-AREIARQAAEEVEAD---- |
5 | 5bunA | 0.12 | 0.11 | 3.76 | 0.45 | CNFpred | | VRSSFNNINASISSINAYKQAVVAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAKQQLANARYTYLINQLNI----------- |
6 | 2i88A | 0.15 | 0.12 | 4.02 | 0.33 | HHsearch-2 | | KGKKIGNVNEALAAFEKYKDVLNKKF------------SKADRDAIFNALAS--VKYDDWAKH--LDQFAKYLKITGHVSFGYD |
7 | 5cwlA1 | 0.10 | 0.10 | 3.54 | 0.79 | Neff-PPAS | | RRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARRGNT-DAVREALEVALEIARESG-- |
8 | 1whuA | 0.07 | 0.06 | 2.48 | 0.46 | HHsearch | | SAKYTKIMEKLYAVFTRDAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSIILNEYCD----------GRDSGPSS- |
9 | 1xs9A | 0.25 | 0.23 | 7.02 | 0.61 | SP3 | | RNTDAITIHSILDWIEDNRSGYSKWHLQRMFKKETGH----SLGQYIRSRKMTEIAQKLKESNESQQTLTRTF---KNYFDVPP |
10 | 5cwlA1 | 0.07 | 0.07 | 2.89 | 0.47 | PROSPECTOR2 | | TTEDERRARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVKLALEVVARVA---IEAARRGNTDAVREALEVALEIARESG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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