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I-TASSER QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH BSpred ANGLOR BSP-SLIM SAXSTER ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE WDL-RF ATPbind DockRMSD DeepMSA

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 53)

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)
Full name and representative sequence
5201 PF06210
(DUF1003)
click to view
Estimated TM-score=0.49;
hard target.
>Protein of unknown function (DUF1003) (Length=103)
MGTANFLLYMTVFVIVWIAINVVGLFGLHWDPYPFILLNLFFSTQASYAAPLILLAQNRQDDRDRVQIEQDRSRNERNLA
DTEYLTREVAALRITLREVATRD
5202 PF06102
(RRP36)
click to view
Estimated TM-score=0.49;
hard target.
>rRNA biogenesis protein RRP36 (Length=165)
RANKNRPMEISSKKPVPKFRKAAPVKKKVTRDPRFDDLSGDYREELFSRSYGFLDDIKHREREKVEKSVKKEKNPEKKKE
LQFLLNRMKQQELSDNKKEQQKRIERDWKKKEQTRVKEGKNPFYLKKAERRKLELAEKYKELQKSGKVDAYLGKKRKKTA
QKEKK
5203 PF06072
(Herpes_US9)
click to view
Estimated TM-score=0.49;
hard target.
>Alphaherpesvirus tegument protein US9 (Length=59)
CYYSDSENETADEFLRRIGKYQHKIYHRKKFCYITLIIVFVFAMTGAAFALGYITSQFV
5204 PF06019
(Phage_30_8)
click to view
Estimated TM-score=0.49;
very hard target.
>Phage GP30.8 protein (Length=123)
MNTINLNATIKCRDHDGYKSQVVNELQWMVRSVQGDVVYCTTPDGPSDDFCYHIEIENFFTGEIYRLNSTVYGCIRSKTY
EDEETGYSEDVVWYENARNRAESLIEKIKAKGVIDSAKWTKIK
5205 PF05984
(Cytomega_UL20A)
click to view
Estimated TM-score=0.49;
very hard target.
>Cytomegalovirus UL20A protein (Length=103)
MARRLWILSLLAVTLTVALAAPSQKSKRSVTVEQPSTSTNSDGNTTPSKNVTLSQGGSTTDGDEDYSGGDYDVLITDTDG
GNHQQPQEKTDEHKGEHTKENEK
5206 PF05727
(UPF0228)
click to view
Estimated TM-score=0.49;
hard target.
>Uncharacterised protein family (UPF0228) (Length=116)
MTVNTIDYNSDIMPSRYYMILDRDKTIDIEELVDEENLTGPIKKGNNYIITVTEQAIQDKNFLAILEKNNLPVKKSVYCY
IRLEDESKNGSIPQKDAYQIANELERNEKVLTASPD
5207 PF05661
(DUF808)
click to view
Estimated TM-score=0.49;
hard target.
>Protein of unknown function (DUF808) (Length=303)
AGLVALLDDIAALARMAAASVDDIGAAAGRASAKAAGVVVDDTAVTPRYVTGFSPQRELPMIKRIAIGSLRNKLVFILPA
ILLMSQFLPWLLTPLLMLGGTYLCFEGAEKILHSVRGHETTGQQSAQEAADGERSQEREDQMVAGAIRTDFILSAEIMVI
SLNEVAAEAFWTRAIILVVVAIAITILVYGVVALIVKMDDIGLHLAETKSGAIASLGRGLVAGMPKLLKVLTVVGVVAML
WVGGHILLVGTDSLGWHALYGFVHHLEEAAAHATGGAGAFVGWLVNTFFSAIIGLVVGFVVVG
5208 PF05660
(DUF807)
click to view
Estimated TM-score=0.49;
very hard target.
>Coxiella burnetii protein of unknown function (DUF807) (Length=142)
MLQANLTFLGKTSVGPIMPRSYFGNAGAIQAPRIQKTATGEYTITFLTSRDIKETQPPAVHINFQDEVNGAFCSRLVKPV
QFTYHPENSQFPWKILFQIAVQKGDGSYTDSNIVMITFAMANCNNQAVFNSCKNRVNAELNS
5209 PF05614
(DUF782)
click to view
Estimated TM-score=0.49;
very hard target.
>Circovirus protein of unknown function (DUF782) (Length=104)
MVTIPPLVSRWFPVCGFRVCKISSPFAFATPRWPHNDVYIRLPITLLHFPAHFQKFSQPAEISDKRYRVLLCNGHQTPAL
KQGTHSGRQVTPLSLRSRSSTFHQ
5210 PF05608
(DUF778)
click to view
Estimated TM-score=0.49;
hard target.
>Protein of unknown function (DUF778) (Length=174)
LPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKVLVSASLLSRIWLCMDFVSFVSNYKNFL
IFIKCVCLWQCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWN
MVNVAILLMIKGKW
5211 PF05290
(Baculo_IE-1)
click to view
Estimated TM-score=0.49;
hard target.
>Baculovirus immediate-early protein (IE-0) (Length=139)
GHLNNQPKFQYNMYIFLPYVRQLRQINTLFINDYCCSKIVKSNSAALDLLIAHCDKYLHVIASMNERMQLINVFTEPKLY
QCNICQDTSVEEHFLKPNECCGYNICNMCYANLWKFCNLYPQCPVCKTSFKGSKQVVER
5212 PF05287
(PMG)
click to view
Estimated TM-score=0.49;
very hard target.
>PMG protein (Length=167)
YSCCSANFSSRSLRRCLPSSGSSCGSPYPSNLVYTTTTCSPTICQLGPSLNSGCQETCIEPISCQRSCVVSSPCQTACYY
PRSSTPCSPCQGTYAGCLGFGSRSCRSLGYGSRSCYSVGCGPSGFRSLNCGVSGFPSVWYGPRFYYPAYLASTTFQPSCY
RSVCGTA
5213 PF05274
(Baculo_E25)
click to view
Estimated TM-score=0.49;
very hard target.
>Occlusion-derived virus envelope protein E25 (Length=190)
QSSDSVELNETKQLNVKLNNGRVANLRIAHGDNKLSQVYIAEKPLSIDDIVKEGSNKVGTNSVFLGTVYDYGIKSPNAAS
TSSNVTMTRGAANFDIKEFKSMFIVFKGVTPTKTVEDNGMLRFEVDNMIVCLIDPNTAPLSEREVRELRKSNCTLVYTRN
AAAQQILLENNFTVINAEQTAYLKNYKSYR
5214 PF05088
(Bac_GDH)
click to view
Estimated TM-score=0.49;
hard target.
>Bacterial NAD-glutamate dehydrogenase (Length=1527)
VRVYNPRHEEYGWQSTHTAIEIVNDDMPFLVDSTSMEITRLGYEIHFMNHPIVRVRRDGRGRLLELLPPDAEDALQESLI
HIEVNRRTEPEALEELRWNLERVLGEVRAAVEDWPRMRRKIREIVEEFEKNPPPVDREEVSEVGAFLRWLDDHHFTFLGY
REYELAVEDGEDVLRTVPGTGLGILRQEGREPRSRSFAKLPPEVRRLARSRHLLNLTKANSRSPVHRPSYLDYVGVKRFD
ENGEVCGERRFLGLYTSAAYSMNPRDIPLIRRKIENVMRRTGFPPNSHYEKALLEVFETFPRDQLLQISEEELYDIALGI
VHLQERQRVRLFVRRDTYGRFLSCLVYLPRERHNTQTRQRIQEILQREFNGRSVEFSVHLSESVLARLHFIVYTDSGAPR
DYDIDEIEARIVEATREWPDTLYGALVERFGEERGTELFNRYRNAFPPGYRDEYLTRTAAADIEQMESLGSGEDLGMRLY
HRLEEPEDFLRFRLYRRGDQISLSEVMPLLEDMGVKVLDQRPYRIEPAGGEPVWIHDFGLIHRGDGEFRADGVREIFQDA
FARTWHGAAESDGFNRLVLGARLTWREITVLRAYCKYLRQTETTFSQNYMEDTLSANPRIARLLIELFEARFDPERRERA
AEESERLRGEIESALEHVASLDEDRILRSFLNLIQATLRTNYFREDRAGEPKTYLSLKLDPSRIPELPLPRPMFEIFVYS
PRTEGVHLRGGRVARGGIRWSDRREDFRTEILGLMKAQMVKNAVIVPVGAKGGFVVKRPPADGGREALQREVVECYKTLV
RGMLDVTDNLVDGEVRPPERVVRYDGDDPYLVVAADKGTATFSDIANGISEEYGFWLGDAFASGGSAGYDHKAMGITARG
AWESVKRHFRELGMNVQEEDFTVVGIGDMSGDVFGNGMLQSRHIRLVGAFDHRHIFLDPDPDPERSYEERRRLFELPRST
WADYDPRVISEGGGVWPRTAKSIPLSPQVRELLDVDAERMTPNELISALLKAPVDLLFNGGIGTYVKASGETHAEVGDKA
NDAVRVDAADLRCRVVGEGGNLGFTQRGRIEYALGGGRIYMDAIDNSAGVDCSDHEVNIKILLDSVVESGDMTEKQRNEL
LEEMTEEVASLVLRDNYLQTQAISNSVAQANSMAEVHARYIRALESSGVLNRELEFLPQEEEIAERKSEGGGLAAPEFAV
LLSYTKISTYDGLLKSDLPDDPYFFDEFIRYFPHPLQERFRERMKEHRLRREITATHVTNGMVNRAGTTFAYRMSEETGA
ALPDIARAYTAARQIFSMRELWAEIEALDGRIPATTQTRMLLEARKLVERATRWLLRNRRPPLEIRKTIAYFAPGAAELA
EHIPQFMLDGDRKVLERRARQLAEDGVPADLANRLATLSAMFSALDIVDVAAATGHPVATSAAVYFHLGDRLRLHWLREH
IEALPRDTRWQTLARAALRDDLYNLQAELTAEVLLTAPENRPAPERIEAWAEENRRAVDRTLQVLADINSGGVFDLSTLS
VALREIR
5215 PF05024
(Gpi1)
click to view
Estimated TM-score=0.49;
hard target.
>N-acetylglucosaminyl transferase component (Gpi1) (Length=187)
YNSLWLVANDVIIGIALGSYIIDNAGWVAEEVNQLLSQYTVDALQSSISWLMGWPAGLKLNNELGAFLGDLFLWVIDYWS
SFIEALRPYLPRIIWFIGFSSFAGASMPIALFSDLLSILTVHIYSFYLASARIYHWQLNILISLFHLFRGKKHNVLRNRI
DSCDYDLDQLLVGTILFTLLFFLLPTV
5216 PF04986
(Y2_Tnp)
click to view
Estimated TM-score=0.49;
hard target.
>Putative transposase (Length=177)
GIFTVIHTWGRDQQWHPHIHLSTTAGGVTPDHTWKNLHFYARKVMSMWRYRITWLLSRKYPELVIPDALAVEGSSKRDWN
RFLDTHYRRGWNVNISRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLLMSGDEFMERFSW
HVADKGFRMVRYYGFLS
5217 PF04949
(Transcrip_act)
click to view
Estimated TM-score=0.49;
easy target.
>Transcriptional activator (Length=147)
SGSLSFSGSMSKEDEEMSKTALSTFRAKEEEIEKKKLEVRERVQAQLGRIEQETKRLANIREELEGLADPMKKELSLVRK
KVDSVNKELKPLGQTCQKKEKEYKDALEAFNEKNKEKVQLITRLMELVSESEKLRMKKLEELSKSIE
5218 PF04899
(MbeD_MobD)
click to view
Estimated TM-score=0.49;
easy target.
>MbeD/MobD like (Length=70)
MTELETQLLSALEQLQQDYSQRLDEWESAFAEWQRMCGLMQRENAALSERVTNLSQQVDRLSGQLSRLSR
5219 PF04813
(HNF-1A_C)
click to view
Estimated TM-score=0.49;
very hard target.
>Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus (Length=89)
VFTSDPEASGESGLHTPVSQATTLHVPSQDPAGIQHLQPAHRLSASPTVSSSSLVLYQSSDSTNGHSHLLPSNHGVIETF
ISTQMASSS
5220 PF04694
(Corona_3)
click to view
Estimated TM-score=0.49;
easy target.
>Coronavirus ORF3 protein (Length=59)
MDIVKSIDIFVDAVLDELDRAYFAVTLKVEFKTGKLLVCIGFGDTLLEAKDKAYAKLGL
5221 PF04662
(Luteo_PO)
click to view
Estimated TM-score=0.49;
very hard target.
>Luteovirus P0 protein (Length=227)
FIAQPCGRVLVFDVASHTPSFFTRYSVELSLRALDPLFTRAVTDFRYTQNEIDLFCVSLGFLLPILLTGESYSWRGHLNL
PLSYTELLVRWGLAVGYFPAFSADGDIRQNPELRIDLSTMSTRSFYEQFLLRYNTSGLAKAIVGQQECFQSGMESFKRFL
HYRLTCFESCLPRPRWESPLAPGPYLDRAFEATLLGRMVGHNQLLFTGLSSDITRYYNELVVEGVPV
5222 PF04599
(Pox_G5)
click to view
Estimated TM-score=0.49;
easy target.
>Poxvirus G5 protein (Length=426)
MGIKNLKTLLLETGSLYKITSIERNIINGIYVDTMSFFVSIAHSVNNVEDLYESFITYIYQWKKIGNVTLFIDRGVIHIK
ESLREKRRALSQNTMQRKRLEIEKLTINIDNLDIDDIMYDEIKTDMELRLRKLTFHNFLSSSSKLKTLLESFLETVIDDV
NIIYCDGIDAEFVMCKNAKKLADQTGIWPLMISTDQDTLLFSSCDYKKKIIKTMNQMFIYIPCSKSRYLSKLVALTNGCD
YFNGLYGLCITQKTLESIPLFDDFTIDNIVQSLAVRNYTKKSTDKYINVQEIIDFIDKYSSSDDSVYSNTLPEKCVTIQE
FMFSALYKKWKTFDDTLLRGVSICSSLICILSPKKAISNDDIDILCKIINKNNKNKNDIINDIRNITNIFGYELYKNKNI
YLAIQNLNTIMLCYRDTFYFNSENII
5223 PF04549
(CD47)
click to view
Estimated TM-score=0.49;
hard target.
>CD47 transmembrane region (Length=148)
LIVIFPILAILLSWGQFGILSLKYKSNRTNEKTILLIFAGLVLTIIVIVGAILFIPGEYSVKNSSGLGLIVIPTVILILL
QYCVFMTAFGMSSFAIAILIIQVLGYILAVVGLSLCISECAPMQGPLLISGLGIIALAELLGLVYMKF
5224 PF04394
(DUF536)
click to view
Estimated TM-score=0.49;
easy target.
>Protein of unknown function, DUF536 (Length=43)
DEQLRVKDIQISEKDKQLDQQQQLTLKAMADKDVLKLELEEAK
5225 PF04369
(Lactococcin)
click to view
Estimated TM-score=0.49;
hard target.
>Lactococcin-like family (Length=60)
MKNQLNFNIVSDEELAEVNGGSLQYVMSAGPYTWYKDTRTGKTICKQTIDTASYTFGVMA
5226 PF04277
(OAD_gamma)
click to view
Estimated TM-score=0.49;
hard target.
>Oxaloacetate decarboxylase, gamma chain (Length=81)
EKALLNTLLGMGTVFVVLIFICLLISCFKYIPKLQDKFSKKAAPEPAKAAPAPVTAALEEEAEAEDDLELVAVITAAVAA
S
5227 PF04245
(NA37)
click to view
Estimated TM-score=0.49;
very hard target.
>37-kD nucleoid-associated bacterial protein (Length=318)
ILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGHWLSSVRKNETSFLEFSNNSAEK
LKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAKMDIAARIDLSTWETDSDSNRYL
TFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDKEEKQQYRKQVYDYCNGQLQAGEELTVKELAS
ELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGERVFYDPETDTLTIKGTPPNLK
5228 PF04159
(NB)
click to view
Estimated TM-score=0.49;
very hard target.
>NB glycoprotein (Length=100)
MNNATFNCTNINPITHIRGSIIITICVSLIVILIVFGCIAKIFINKNNCTNNVIRVHKRIKCPDCEPFCNKRDDISTPRA
GVDIPSFILPGLNLSEGTPN
5229 PF03906
(Phage_T7_tail)
click to view
Estimated TM-score=0.49;
hard target.
>Phage T7 tail fibre protein (Length=153)
MAYTPYSYVQLKADGATTNFPFNFPYLDTAHIQVSVDTVVTDFTWVDSYTIRIASAPVAGGVVEIRRITPKDSAIVSFQD
GSTLLEADLDLMVTYNLYCAQEAYDGTQASIHLTADGVWDGQGVRATDFADPVDAQDLMTLNYMNVNFKNTML
5230 PF03875
(Statherin)
click to view
Estimated TM-score=0.49;
hard target.
>Statherin (Length=41)
DSSEEKFLRRIGRFGYGYGPYQPVPEQPLYPQPYQPQYQQY
5231 PF03634
(TCP)
click to view
Estimated TM-score=0.49;
hard target.
>TCP family transcription factor (Length=154)
TGKKDRHSKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPKVRKCSSTSAGKSV
SSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKPVFNPVDRESREKARARARDRTREKMKN
5232 PF03555
(Flu_C_NS2)
click to view
Estimated TM-score=0.49;
hard target.
>Influenza C non-structural protein (NS2) (Length=57)
VKSTNLMAFVATKMLERQEDLDTCTEMQVEKMKTSTKARLRTESSFAPRTWEDAIKD
5233 PF03381
(CDC50)
click to view
Estimated TM-score=0.49;
very hard target.
>LEM3 (ligand-effect modulator 3) family / CDC50 family (Length=288)
LYIAADRVQQVMFDYTTCDKSNAPANMAWSAATNTCTITFTIDKPFVKPVFLYYRLTSFYQNHRRYVKSYDSSQLRGDVV
TASSLSDTCSPIKQPANSSNVQYYPCGLIANSMFSDNILDPVRTSDSYTYVFTEKGISWPSDASKYRTSKLFSEKTDQEI
RTSILPPPAWRTGFKWKGYDQGYNKTNFPDLATWERFQVWMRTAGLPNFRKLWGRNDSEDMPAGTYTIQIQSNFEVARFG
GTKSVVISTVSLIGGKNTFLGVAYIVVGVVCWAFGLAFLARHLIRPRK
5234 PF03229
(Alpha_GJ)
click to view
Estimated TM-score=0.49;
very hard target.
>Alphavirus glycoprotein J (Length=129)
MRSLLFVVGAWVLAAVTDLTPKAALATGANATAGVANATATAGVANATDAEATSPGAAATSAAVVTPPPTDSTQTAETPG
PSPPTDFALPLVIGGLCALTLAAMGAGALLRRRCRRAARDRRRVSYLYA
5235 PF03197
(FRD2)
click to view
Estimated TM-score=0.49;
hard target.
>Bacteriophage FRD2 protein (Length=103)
SMVGIIQENGGWFEVKSISSLDGFDYVTEIICANGEIYNDDGMGDDYFELSEEEFYCFREYKEPTSEEDEVKDKVSGVTK
IHCIVDENNVDEIIELLRKTFKK
5236 PF03113
(RSV_NS2)
click to view
Estimated TM-score=0.49;
very hard target.
>Respiratory synctial virus non-structural protein NS2 (Length=124)
MSTTNDNTTMQRLMITDMRPLSMDSIITSLTKEIITHKFIYLINNECIVRKLDERQATFTFLVNYEMKLLHKVGSTKYKK
YTEYNTKYGTFPMPIFINHGGFLECIGIKPTKHTPIIYKYDLNP
5237 PF02722
(MOSP_C)
click to view
Estimated TM-score=0.49;
hard target.
>Major Outer Sheath Protein C-terminal domain (Length=199)
DALLRMQWKWLSSGIYFATAGTNIFGKRVFATTRAHYFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYIPLTYIRYRN
NGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLAPHTSVLGTTNRFNIINPAGNLLNERALQYQVGLTFSPFEKVE
LSAQWEQGVLADAPYMGIAESIWSERHFGTLVCGMKVTW
5238 PF02107
(FlgH)
click to view
Estimated TM-score=0.49;
very hard target.
>Flagellar L-ring protein (Length=182)
QNNGAIFQPASNQGLFADYKARQVGDVLTVVLAERTQARKSASTSTSKDSNVNMNNPTVLGRPVTRGGVPVLDASVSGSR
SFEGEGDSAQSNQLDGSITVMVSEVLPNGNLVVQGEKWLQINQGQEYIRLRGIVRPVDIRADNTVNSNQIADAQVAYGGR
GTLADSNNPGWLTRFFNSPVWP
5239 PF02104
(SURF1)
click to view
Estimated TM-score=0.49;
very hard target.
>SURF1 family (Length=202)
LALPLLLSLGFWQLDRAAEKRALEAAFDAQRQAPPVELTRAEAADLARYQRVIVRGEFDNEHTWLLDNKQRSGRVGYEVV
TPLVLEDGARILVNRGWIPSTGNRQQLPEVPAVAGERTLFAQVAEVSDHPMLDAHSDSRGWPKVILQIEPVTMGRQLGQR
LAPFYLLIDDNSAGAFETRWQAVNMSTETHIGYAVQWFAMAL
5240 PF01277
(Oleosin)
click to view
Estimated TM-score=0.49;
hard target.
>Oleosin (Length=103)
SQVLAVLTLLPIGGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRL
RYATGTEQLDLDHAKRRVQDMAD
5241 PF18804
(CxC3)
click to view
Estimated TM-score=0.48;
very hard target.
>CxC3 like cysteine cluster associated with KDZ transposases (Length=113)
VPVPCYLPLSCPKCSMTGTLNLQGGEKEKIVITKDGRFDLNSTLVCCSSDSCSYGAELTEKDYIQSNWWPGTPSSSTYLF
SEDLLQFWFHLKHQNLGSSERKFIETLNRISKA
5242 PF17819
(DUF5582)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5582) (Length=146)
CQFETREIDGDNSPVSVETDTESATNVQVFDSFGARFNSNLQAKDQVYSQRFPCISSKLDYIIGREKTEAIETKPDDIPE
YQEGRKSFGYNQTYRRQFPPIVYEDPYQVSLRYMEKHHILQIFQQITENLVYEKPEDPLSFMLCQI
5243 PF17713
(DUF5558)
click to view
Estimated TM-score=0.48;
very hard target.
>Family of unknown function (DUF5558) (Length=124)
MRMYSSDAHERPPSPSLGTTPPHPLPPTGSPRPRQDSAAGNSEEREPRGLRRASGVGSSCKRPTVCMGRQQGLPFCTVCG
YRCSSPERTRGRCAVGKVRVAGGGGAPGGGAGMRCCGCRERNIN
5244 PF17704
(DUF5550)
click to view
Estimated TM-score=0.48;
very hard target.
>Family of unknown function (DUF5550) (Length=123)
MMPLAEAGALAQGGGPSATEWACILRRKTPRHKQPILLMVRASRRSGETSAVLKAGRQSVSGRKNSTSKDLVTLGASSLR
EERGHPLHPRHGKAVHLRTRGRTRGWVQTRAWMSRRTRGPAER
5245 PF17696
(DUF5542)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5542) (Length=68)
MEVDAAAEDGRDGPRERRGVGEAGQQQQNHEVRPQSGTDRFSKHSYWLDLWLFILFDLVLFVFVYLLP
5246 PF17686
(DUF5534)
click to view
Estimated TM-score=0.48;
very hard target.
>Family of unknown function (DUF5534) (Length=180)
LPYADGLHPTGNITGLPGSKRSQPPRNITKEPKVFFHKTQLPGIQGAASRSTAASPTNPMKFLRNKAIIRHRPALVKVIL
ISSVAFSIALICGMAISYMIYRLAQAEERQQLESLYKNLRIPLLGDEEEGSEDEGESTHLLPENEKELEKFIHSVIISKR
SKNIKKKLREEQNSVTENKT
5247 PF17673
(DUF5532)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5532) (Length=90)
MFLTGDTSPAEDNREATLPQCSLPELYACIENFNKESKKSNLLKMHGISLNEAQEVLARNLNVMSFTRGTDVRGDLQPVI
RCTVVKKEKQ
5248 PF17672
(DUF5589)
click to view
Estimated TM-score=0.48;
very hard target.
>Family of unknown function (DUF5589) (Length=129)
GVGVAGCNRGHRHWVPSQLQPSEIKAGVSLAVVTDFAWILAPRPKRATASALGTESPRFLDRPDFFDYPDSDQARLLAVA
QFIGEKPIMFVNSGSSPGLFHHILVGFLVVVVFFLLFQFCTHINFQKGA
5249 PF17654
(Trnau1ap)
click to view
Estimated TM-score=0.48;
very hard target.
>Selenocysteine tRNA 1 associated proteins (Length=100)
YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDALEDPMPQLDVTEANKEFMEQSEEL
YDALMDCHWQPLDTVSSEIP
5250 PF17608
(DUF5504)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5504) (Length=124)
MTKHYKIIGLRILSWVITITGLIIFIGNVHEYGLHFTYNQVLAIIIVILLLVTTMYFSVTPKLLKWNEKYELVWWLCYLC
APIYLFLTNLYNSTDLGYTIKFWLFFGGGAALIIISKYILKNKK
5251 PF17564
(DUF5470)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5470) (Length=73)
MKKVALGKIIENTVESKYKSSSVSSSSSTGASAKLSLSEYYKTFEANKVGQHTTYDVVGKRDYTKFDKLVKKY
5252 PF17537
(DUF5455)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5455) (Length=103)
PLLWNAIKSVFFAVVSYGIDRIAKKYAPAIVALGVIVSAIVGAVTVYLNFMFEKIAQLNETIPEVVLNVWGWVMPGNAIP
CLTILLTARAMSWFVKMGLNVIN
5253 PF17514
(DUF5442)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5442) (Length=107)
LNDYTCGAVSENAANDFIRFVSKGVIIKFGDISEELKKSEKQKLKEYVKDISIRTVNCIMKRFEDDPQAYLINDTLNYYY
KKDISVTDPDHDDPNDYYKRLTKVEGT
5254 PF17496
(DUF5431)
click to view
Estimated TM-score=0.48;
very hard target.
>Family of unknown function (DUF5431) (Length=70)
MSSQHQYGRLPAERQGEVSYETAAKYCYLVRINRVLNTLNIHIPYPKIALRNPAEGRRTGGRCRSGLRIR
5255 PF17402
(DUF5408)
click to view
Estimated TM-score=0.48;
easy target.
>Family of unknown function (DUF5408) (Length=63)
REEDSNKIAKRAVKIALFCVFATLLLSLINIYILINQVSATAAMSKEIKALQEKVGIEREKFN
5256 PF17353
(DUF5381)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5381) (Length=167)
TFDVKSRMSFRVWVFAGTAGFGLIGAWLFYEAIKLESKYSLLYVGVGTFGVIYGLMTFLMVFPAFTKKGNIIFTIIEGED
GRIFSGKKSVLFKDIKSLKMAEHRYSPKGIFLMDILIETRGNGRVRIPTYNILPEPEFYKAVELYILPYMTEEARAEWIG
QFTEAQR
5257 PF17313
(DUF5359)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5359) (Length=56)
MKTVERIILKLIIVQFVFLLITQFFFHHMDAFPELKQLTQYEGVTDQNFTELLETF
5258 PF17305
(DUF5354)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5354) (Length=128)
NTVQDAQEQLTKKIRCWEPIEENIAGNNFSGKHTLSEPIYDLCSYMPDPKNWNKGYVNGVDMDSDDYTNVFNFFQVTHPR
LAMLNVCLQEAFQFHVAGRPSQTSIRCLCKRDGCNLPKEFTTFLDFNK
5259 PF17233
(DUF5308)
click to view
Estimated TM-score=0.48;
hard target.
>Family of unknown function (DUF5308) (Length=166)
PTLALHLTDLTLTPLITSASSPAHLESLTSLTSSAITAQTAAQRANLGRPQRIMVEYPDSGAVVLQSYLDPRESGGGGGG
VLESEAGSVSKYKHDHGHGHGHDAEADVDVDVDVDVEADDATARTADDAGPPVLIGVVVAASSDDAREARRAAARLERIG
REIQKE
5260 PF17220
(DUF5137)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein of unknown function (DUF5137) (Length=85)
MEQENIDPYEEFYLNSISAEQNKRKDELSQVQTEHLYYRSLEPEKFPALQSIDISESSKGITRKRGVDDNLKSSCPSEND
GKKKR
5261 PF17184
(Rit1_C)
click to view
Estimated TM-score=0.48;
very hard target.
>Rit1 N-terminal domain (Length=258)
LKRSNLSITNRLHSIQEDAYFVSEVTSAFNDRPLIANERCGSWYIAPQNKRGSAYFKSTDGHTGQWKFSTRRLNVHLLSI
IGENDGCIIVDSTRRGKRMPDALSKTVPVWCCVLNRALFPNATERHRLYTPPNVVSESEHAQVEARIEGFVESLKRLDID
LEGLRGQVKRPLRPMWVTQDSQLVPTNEVFEDFHPVICCTCSRRVVGGEMSEGGYIQGAGDDTENWALGLTPPVFWEHEK
ELLSTPEADLRDVVLALV
5262 PF17110
(TFB6)
click to view
Estimated TM-score=0.48;
very hard target.
>Subunit 11 of the general transcription factor TFIIH (Length=183)
GYKSMAELCKDLDDVINIIWLSGTPSLQIPYLLNIASEFTTWLEGFPPSPSATFSLLRKLDHCFASLLFGYDIDTQETLP
GFENGLRAGLSRTDMVRCKSVIERTRVLVVEVMSKEPADEDQDGGIGGPGIQTPKPDDDTDVEAETDATHDMMNDFNDGD
DDEDELLHMNVAKVYENTLVKLG
5263 PF17081
(SOP4)
click to view
Estimated TM-score=0.48;
hard target.
>Suppressor of PMA 1-7 protein (Length=204)
IIKGRFNYTMVNIHQYPVSRTHFTLYQIGNYSTNEPYFATTELKDNLGNFEFKNLPLNLGTNATTYFVMYPSSLDFNLKP
NRILIEFTDRGNGTVESKAFKNYFGREFFPSKDITYPEKLESISMDPFIEIALVHIAPRRSYFQVRNAGILQSGIIGNIL
SSRWKTAAVITVICLAIFPFIVEKFDPETTKAMKEDALRKQREK
5264 PF17052
(CAF20)
click to view
Estimated TM-score=0.48;
hard target.
>Cap associated factor (Length=166)
KYTEEQLIELKTEAYTPSPQILDAFNKLIDEVRESIEQHHQHQKKWNNGDTYIDEHGNERSYHHMNRRRQSKGAAAAGAR
PNLRKKSEAVVDEDGWATLAKPKKGSFAEGDGIEERNKFRESSNGGGGTVRARPNNKNLGSSKAVDPREIISDKQTKAFN
AFAALD
5265 PF17040
(CBP_CCPA)
click to view
Estimated TM-score=0.48;
very hard target.
>Cellulose-complementing protein A (Length=119)
TDDWAPVPKAQQRRGQRPTGPGFFFARAGDRTQMGRLFQPTPVPTAQPVLKPASKVTTMTKLDKNSWNKSAGRQPAPTDN
SPTLTEVFMTLGGRATDRLIPKPSLREALLRKREDENGQ
5266 PF16894
(DUF5084)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF5084) (Length=130)
MKNGWWINLAIAGILGLLSVHGFIIAFGAFGVLALNIVWLTVYTPKNNTQAFESTAKPTIYLSIIGIFIMAVLMNILFYI
VLYDDFLDIGLKIYGDTFNIVSKPTLIFSILFFAIGTNYAFQIQRKRLNS
5267 PF16645
(PHtD_u1)
click to view
Estimated TM-score=0.48;
very hard target.
>Unstructured region on Pneumococcal histidine triad protein (Length=66)
NLSNSRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLSQR
5268 PF16628
(Mac_assoc)
click to view
Estimated TM-score=0.48;
very hard target.
>Unstructured region on maltose acetyltransferase (Length=186)
KPSSGKTPVPLQSKDGYTDVGSQYVHEISQQHDRQQSLTEQLEAGKMRSIIVDDSDRTTTQFNNSSPTGVGSSRGSWSKR
SWPNTGHTAYITDHITKSDYRDVPSIHELPREGHPKTDYQIVPPIRELSHGTAHGKPGVSLFQGGIDQRPALATNVDTSS
PQAQARMALSIEHQLSARTVPGEETE
5269 PF16596
(MFMR_assoc)
click to view
Estimated TM-score=0.48;
very hard target.
>Disordered region downstream of MFMR (Length=138)
EKLPIKRSKGSLGSLNMLTGKNNELGKTSGASANGVYSKSAESASEGSSEGSDANSQSDSQLKSGCRQDSLEAETSQNGS
TCHAPQNGGPNTPHAMVNQTMAIMPISAPGAPGGVPGPTTNLNIGMDYWGAPTSSTIP
5270 PF16500
(Cyclin_N2)
click to view
Estimated TM-score=0.48;
very hard target.
>N-terminal region of cyclin_N (Length=139)
EDQENINPEKAAAAQQPRTRAGLAVLKAGNSRGPALQQRPKTRRVAPLKDLPINDEHVTVPPWKANSKQPAFTIHVDEAE
EETQKRPAESKKPESEDVLAFNSAVTLPGPRKPLVPLDYPMDGSFESPHTMDMSIVLED
5271 PF16383
(DUF4992)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (Length=188)
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDATGENATIEWPVVHGAEGYEF
SWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIKTIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWF
IDNPLPETDMEPNEDGTLKELAYELEAN
5272 PF16357
(PepSY_TM_like_2)
click to view
Estimated TM-score=0.48;
hard target.
>Putative PepSY_TM-like (Length=200)
YWLKTLHQWHWISSAVCLLGMLLFSVTGITLNHASQIESRPAVTARELQLPPELKALVAPDASSPSSPRAPLPARLADWV
DTQLAVDVRGRDAEWSDEELYVSLPRPGGDAWLRIDRESGAAEYERTDRGWISYLNDLHKGRHTGVAWSWFIDVFAVACL
VFCLTGLFILKLHAANRPTTWPIVGLGLVIPLLLALLFIH
5273 PF16239
(DUF4898)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4898) (Length=82)
DNLIEMIGKSGSVKFVKYVSPGLIVDAQKFFKTFIPFAKYYVVIVPADINNDKVKDELISMAKSSFNFTILYSYKLKDRL
LI
5274 PF16038
(TMIE)
click to view
Estimated TM-score=0.48;
hard target.
>TMIE protein (Length=85)
KETVVFWDMRLWHVVGIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEIPGEDKKK
KKKDS
5275 PF15989
(DUF4768)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4768) (Length=88)
KHLIRKKRVAIELDAPYDLHTTHMFCDLDVRGRHRIVTYFPNHCIWVWNNKYVHEGFYHLFKHYQTEAFFFGQYNERLKQ
YETVAHVW
5276 PF15973
(DUF4766)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4766) (Length=115)
GGGGGGGSTQLIKVILENGNGYGNGGGVAGGQGYGHGYANEHSHGSYGEQVYKVIEHAAPVAPIAYHANSGGSSSGYAYG
QSYAAGHSYGGGDASYNNQQLNSILPQIIQLVLQE
5277 PF15888
(FOG_N)
click to view
Estimated TM-score=0.48;
very hard target.
>Folded gastrulation N-terminus (Length=117)
ITPKSIFIAPQLNGFNGSLCPPDMKVDYNGKCIQVQSNINPADIVLTKLQSLLGDGGGVSNAGGNEDYDYEYDTSGPFQV
NLPLSIDLPMEEPPKRAESFYDTMLVDVPSSLTTTTG
5278 PF15854
(GPR15L)
click to view
Estimated TM-score=0.48;
very hard target.
>G-protein coupled receptor ligand 15 (Length=80)
MRLLVLSSLLCILLLCFSIFSTEGKRRPAKAWSGRRTRLCCHRVPSPNSTNLKGHHVRLCKPCKLEPEPRLWVVPGALPQ
5279 PF15833
(DUF4714)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF4714) (Length=149)
MPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVY
RRGGFLLLLALLVLTCLALALLAVYLSVLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQA
5280 PF15820
(ECSCR)
click to view
Estimated TM-score=0.48;
very hard target.
>Endothelial cell-specific chemotaxis regulator (Length=103)
SLRIREDSTILPSPTSETVLTVAAFGVISFIVILVVVVIILVSVVSLRFKCRKNKESEDPQKPGSSGLSESCSTANGEKD
SITLISMKNINMNNSKGCPTAEK
5281 PF15817
(TMEM40)
click to view
Estimated TM-score=0.48;
very hard target.
>Transmembrane protein 40 family (Length=120)
ELQLYGDAPGEVVPSGESGLRRRGSDPASGEVEASQLRRLNIKKDDEFFHFVLLCFAIGALLVCYHYYADWFMSLGVGLL
TFASLETVGIYFGLVYRIHSVLQGFIPLFQKFRLTGFRKT
5282 PF15815
(MKRN1_C)
click to view
Estimated TM-score=0.48;
hard target.
>E3 ubiquitin-protein ligase makorin-1, C-terminal (Length=81)
PQRQKVGTSSRYRAQRRNHFWEFIEERESSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDFYD
L
5283 PF15766
(DUF4695)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4695) (Length=105)
NYQEVMPHFLFITEEFPQPLLSTKAARGKGKLRRPRQSRFKTQPITFDEIQEVEDEGVSPTEEEKAKKSFLHSLECLRRS
SQNLSLQRGSLNSCKLRTSLDSSDS
5284 PF15713
(PTPRCAP)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein tyrosine phosphatase receptor type C-associated (Length=157)
SRDSGGYYHPARLGAALWGRTRRLFWASPPGRWLQARIELGSPDEDPERQEDEQDVEDDYYDMEGGREEVESREEGQPCG
EEPSPQQGPGPAEEAHDGDASDADDAEGALALSCQGPAGSGGSAEALLSDLHAFAGSAAWDDSARPAGGQELHVTAL
5285 PF15706
(TMEM132D_C)
click to view
Estimated TM-score=0.48;
hard target.
>Mature oligodendrocyte transmembrane protein, TMEM132D, C-term (Length=84)
SPSQADLPRSHGESDENGLTPASQGLSDLETGMYALLGVFCLAILVFLINCAAFALKYRHKQVPLEGPASVSHSHDWVWL
GNEA
5286 PF15680
(OFCC1)
click to view
Estimated TM-score=0.48;
very hard target.
>Orofacial cleft 1 candidate gene 1 protein (Length=108)
KFQQKALKQTKQKKSKSAEFLMVKEERAATEGIENPAFNISSTDLSAYQPSEEKVIRHDKPDSTLAAHQQKLRLQAHAEP
RGNEYSRNYFDPLMDEEINPRQCGMEVS
5287 PF15545
(Ntox8)
click to view
Estimated TM-score=0.48;
hard target.
>Bacterial toxin 8 (Length=74)
LAYDMKQPKSVRGWVLNEIKRQKDFAAMGIKKKLRLPPGMDLAHWRGFESAKGYDYTYTDLNTRSLHKTQHKID
5288 PF15532
(Ntox30)
click to view
Estimated TM-score=0.48;
very hard target.
>Bacterial toxin 30 (Length=103)
NPLSIIPKDAVQEPWKPIPGGVEHGIKWKWTDDVTGKTVRMRVHGPDLGPHAGPNASSGPIYRIQIGHQFQDEAGKLYHA
QIGNVNSPNYNEAAINDTHIPWP
5289 PF15389
(DUF4612)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF4612) (Length=110)
GCTSAKQVSAVPNDEEGRGKAYSNGDLYADEYKMKGVEEVKYMRGEENRVNARNQENLEKSHVQYRGKPQKEVAAANIKS
NIHTSESQQEFFRMLDEKIEKGRDYCSEGE
5290 PF15366
(DUF4597)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF4597) (Length=63)
MCVSSSSGSHDEAPVLSDKHLDVPDIIITPPTPTGMMLPRDSRRTVWLDETGSCPDDGEIDPE
5291 PF15354
(KAAG1)
click to view
Estimated TM-score=0.48;
very hard target.
>Kidney-associated antigen 1 (Length=84)
MDDDAAPRVEGVPVAVHKHALHDGLRQVAGPGAAAAHLPRWPPPQLAASRREAPPLSQRPHRTQGAGSPPETNEKLTNPQ
VKEK
5292 PF15325
(MRI)
click to view
Estimated TM-score=0.48;
very hard target.
>Modulator of retrovirus infection (Length=106)
TVYCMNEAEIVDVALGILIESRKQEKACEQPALAGADNPEHSPPCSMSPHTSSGSSSEEEDSGKQALAPGLSPSQRPGGS
SSACSRSPEEEEEEDVLKYVREIFFS
5293 PF15281
(Consortin_C)
click to view
Estimated TM-score=0.48;
very hard target.
>Consortin C-terminus (Length=117)
EISPASGLISILKKRNMPTDNFSMSASPESRSNKPTTKRRVRFKVADDGFDSDVGGRDSCLLLFLLCLVTVVISMGGTTL
YCALGDVHSSVCQDFSRNVDFYFGQVQRAVAQIHQWL
5294 PF15264
(TSSC4)
click to view
Estimated TM-score=0.48;
very hard target.
>Tumour suppressing sub-chromosomal transferable candidate 4 (Length=116)
DIFDCLEGAARRAPSSVAHTSMSDNGGFKQPLAPSGRSPVEGLGRAHRSPASPRVPRVPDYVAHPERWTKYSLEDVTEVS
EQSNQAAALAFLGSQSLAAPTDCVSSFNQDPSSCGE
5295 PF15210
(SFTA2)
click to view
Estimated TM-score=0.48;
easy target.
>Surfactant-associated protein 2 (Length=59)
AGPGMTLQLKLKDSFLANVSYDSSFLEFLEKLCLLFHLPSGTNVTLHRAGCPHHVICRV
5296 PF15201
(Rod_cone_degen)
click to view
Estimated TM-score=0.48;
hard target.
>Progressive rod-cone degeneration (Length=54)
MCTTLFLLSTLAMLWRRRFANRVQPEPSDVDGAARGSSLDADPQSSGREKEPLK
5297 PF15199
(DAOA)
click to view
Estimated TM-score=0.48;
hard target.
>D-amino acid oxidase activator (Length=82)
MAQRHLQRSLCPWVSYLPQPYAELEEVSSHVGKVFMARNYEFLAYEASKDRRQPLERMWTCNYNQQKDQSCNHKEITSTK
AE
5298 PF15168
(TRIQK)
click to view
Estimated TM-score=0.48;
hard target.
>Triple QxxK/R motif-containing protein family (Length=78)
MGKKDASAARLPVDQYRKQIGKQDYKKTKPALRATRLKAEAKKSAPGIRDTILVVLAVLVFLLCVYAFFYLNLSTELN
5299 PF15131
(DUF4567)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4567) (Length=75)
RLDESPTPLGLQHHLELGKALAMALPPLVVEGPATHHIAGGRLADLALGVAFGPWRVRLSLVRQVAKDGPVALLA
5300 PF15129
(FAM150)
click to view
Estimated TM-score=0.48;
hard target.
>FAM150 family (Length=120)
DRQSLLNLIMEIIQELKRYHLEKDSGVQYFSKHDYNLDRREVADYGGYQDEQRVEIVPRDLRMKDKFLKHLTGPLYFSPK
CSKHFHRLYHNTRDCTIPAYYKRCARLLTRLAVSPMCMEG

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